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A

AccessLevel - Enum in com.dnanexus
A permission level that a user can be given in a particular project or container.
add(JsonNode) - Method in class com.dnanexus.DXJSON.ArrayBuilder
Adds the specified JsonNode to the end of the array.
add(String) - Method in class com.dnanexus.DXJSON.ArrayBuilder
Adds the specified String to the end of the array.
addAll(List<JsonNode>) - Method in class com.dnanexus.DXJSON.ArrayBuilder
Adds the specified JsonNode objects, in order, to the end of the array.
addAllStrings(List<String>) - Method in class com.dnanexus.DXJSON.ArrayBuilder
Adds the specified String objects, in order, to the end of the array.
addStage(DXApplet, String, Object, int) - Method in class com.dnanexus.DXWorkflow
Adds a stage to a workflow.
addTags(List<String>) - Method in class com.dnanexus.DXDataObject
Adds the specified tags to the object.
addTags(Collection<String>) - Method in class com.dnanexus.DXDataObject.Builder
Adds the specified tags to the newly created data object.
addTags(Collection<String>) - Method in class com.dnanexus.ExecutableRunner
Adds the specified tags to the resulting execution.
addTypes(List<String>) - Method in class com.dnanexus.DXDataObject
Adds the specified types to the object.
addTypes(Collection<String>) - Method in class com.dnanexus.DXDataObject.Builder
Adds the specified types to the newly created data object.
allOf(List<DXSearch.PropertiesQuery>) - Static method in class com.dnanexus.DXSearch.PropertiesQuery
A query that must match all of the property queries in the provided list.
allOf(DXSearch.PropertiesQuery...) - Static method in class com.dnanexus.DXSearch.PropertiesQuery
A query that must match all of the specified property queries recursively.
allOf(List<DXSearch.TagsQuery>) - Static method in class com.dnanexus.DXSearch.TagsQuery
A query that must match all of the tag queries in the provided list.
allOf(String...) - Static method in class com.dnanexus.DXSearch.TagsQuery
A query that must match all of the specified tags.
allOf(DXSearch.TagsQuery...) - Static method in class com.dnanexus.DXSearch.TagsQuery
A query that must match all of the specified tag queries recursively.
allOf(List<DXSearch.TypeQuery>) - Static method in class com.dnanexus.DXSearch.TypeQuery
A query that must match all of the type queries in the provided list.
allOf(String...) - Static method in class com.dnanexus.DXSearch.TypeQuery
A query that must match all of the specified types.
allOf(DXSearch.TypeQuery...) - Static method in class com.dnanexus.DXSearch.TypeQuery
A query that must match all of the specified type queries recursively.
analysis - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
analysisAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisAddTags method with an empty input, deserializing to an object of the specified class.
analysisAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisAddTags method with the given input, deserializing to an object of the specified class.
analysisAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
analysisAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisAddTags method with the given input using the given environment, deserializing to an object of the specified class.
analysisAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisAddTags(String, Class) instead and supply your own class to deserialize to.
analysisAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisAddTags(String, Object, Class) instead and supply your own class to deserialize to.
analysisAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
analysisAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
analysisDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisDescribe method with an empty input, deserializing to an object of the specified class.
analysisDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisDescribe method with the given input, deserializing to an object of the specified class.
analysisDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
analysisDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisDescribe method with the given input using the given environment, deserializing to an object of the specified class.
analysisDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisDescribe(String, Class) instead and supply your own class to deserialize to.
analysisDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisDescribe(String, Object, Class) instead and supply your own class to deserialize to.
analysisDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
analysisDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
analysisRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisRemoveTags method with an empty input, deserializing to an object of the specified class.
analysisRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisRemoveTags method with the given input, deserializing to an object of the specified class.
analysisRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
analysisRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
analysisRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisRemoveTags(String, Class) instead and supply your own class to deserialize to.
analysisRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
analysisRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
analysisRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
analysisSetProperties(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisSetProperties method with an empty input, deserializing to an object of the specified class.
analysisSetProperties(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisSetProperties method with the given input, deserializing to an object of the specified class.
analysisSetProperties(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisSetProperties method with an empty input using the given environment, deserializing to an object of the specified class.
analysisSetProperties(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisSetProperties method with the given input using the given environment, deserializing to an object of the specified class.
analysisSetProperties(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisSetProperties(String, Class) instead and supply your own class to deserialize to.
analysisSetProperties(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisSetProperties(String, Object, Class) instead and supply your own class to deserialize to.
analysisSetProperties(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisSetProperties(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
analysisSetProperties(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisSetProperties(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
AnalysisState - Enum in com.dnanexus
The state of an analysis in the system.
analysisTerminate(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisTerminate method with an empty input, deserializing to an object of the specified class.
analysisTerminate(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the analysisTerminate method with the given input, deserializing to an object of the specified class.
analysisTerminate(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisTerminate method with an empty input using the given environment, deserializing to an object of the specified class.
analysisTerminate(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the analysisTerminate method with the given input using the given environment, deserializing to an object of the specified class.
analysisTerminate(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisTerminate(String, Class) instead and supply your own class to deserialize to.
analysisTerminate(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisTerminate(String, Object, Class) instead and supply your own class to deserialize to.
analysisTerminate(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisTerminate(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
analysisTerminate(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.analysisTerminate(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
anyOf(List<DXSearch.PropertiesQuery>) - Static method in class com.dnanexus.DXSearch.PropertiesQuery
A query that matches any of the property queries in the provided list.
anyOf(DXSearch.PropertiesQuery...) - Static method in class com.dnanexus.DXSearch.PropertiesQuery
A query that matches any of the specified property queries recursively.
anyOf(List<DXSearch.TagsQuery>) - Static method in class com.dnanexus.DXSearch.TagsQuery
A query that matches any of the tag queries in the provided list.
anyOf(String...) - Static method in class com.dnanexus.DXSearch.TagsQuery
A query that matches any of the specified tags.
anyOf(DXSearch.TagsQuery...) - Static method in class com.dnanexus.DXSearch.TagsQuery
A query that matches any of the specified tag queries recursively.
anyOf(List<DXSearch.TypeQuery>) - Static method in class com.dnanexus.DXSearch.TypeQuery
A query that matches any of the type queries in the provided list.
anyOf(String...) - Static method in class com.dnanexus.DXSearch.TypeQuery
A query that matches any of the specified types.
anyOf(DXSearch.TypeQuery...) - Static method in class com.dnanexus.DXSearch.TypeQuery
A query that matches any of the specified type queries recursively.
apiCallOnObject(String, JsonNode, DXHTTPRequest.RetryStrategy) - Method in class com.dnanexus.DXObject
Calls the specified API method on this object (with the specified input hash) and returns its result.
apiCallOnObject(String, DXHTTPRequest.RetryStrategy) - Method in class com.dnanexus.DXObject
Calls the specified API method on this object (with an empty input hash) and returns its result.
appAddAuthorizedUsers(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appAddAuthorizedUsers method with an empty input, deserializing to an object of the specified class.
appAddAuthorizedUsers(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appAddAuthorizedUsers method with the given input, deserializing to an object of the specified class.
appAddAuthorizedUsers(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appAddAuthorizedUsers method with an empty input using the given environment, deserializing to an object of the specified class.
appAddAuthorizedUsers(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appAddAuthorizedUsers method with the given input using the given environment, deserializing to an object of the specified class.
appAddAuthorizedUsers(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddAuthorizedUsers(String, Class) instead and supply your own class to deserialize to.
appAddAuthorizedUsers(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddAuthorizedUsers(String, Object, Class) instead and supply your own class to deserialize to.
appAddAuthorizedUsers(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddAuthorizedUsers(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appAddAuthorizedUsers(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddAuthorizedUsers(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appAddCategories(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appAddCategories method with an empty input, deserializing to an object of the specified class.
appAddCategories(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appAddCategories method with the given input, deserializing to an object of the specified class.
appAddCategories(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appAddCategories method with an empty input using the given environment, deserializing to an object of the specified class.
appAddCategories(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appAddCategories method with the given input using the given environment, deserializing to an object of the specified class.
appAddCategories(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddCategories(String, Class) instead and supply your own class to deserialize to.
appAddCategories(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddCategories(String, Object, Class) instead and supply your own class to deserialize to.
appAddCategories(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddCategories(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appAddCategories(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddCategories(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appAddDevelopers(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appAddDevelopers method with an empty input, deserializing to an object of the specified class.
appAddDevelopers(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appAddDevelopers method with the given input, deserializing to an object of the specified class.
appAddDevelopers(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appAddDevelopers method with an empty input using the given environment, deserializing to an object of the specified class.
appAddDevelopers(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appAddDevelopers method with the given input using the given environment, deserializing to an object of the specified class.
appAddDevelopers(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddDevelopers(String, Class) instead and supply your own class to deserialize to.
appAddDevelopers(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddDevelopers(String, Object, Class) instead and supply your own class to deserialize to.
appAddDevelopers(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddDevelopers(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appAddDevelopers(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddDevelopers(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appAddTags method with an empty input, deserializing to an object of the specified class.
appAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appAddTags method with the given input, deserializing to an object of the specified class.
appAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
appAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appAddTags method with the given input using the given environment, deserializing to an object of the specified class.
appAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddTags(String, Class) instead and supply your own class to deserialize to.
appAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddTags(String, Object, Class) instead and supply your own class to deserialize to.
appAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appDelete(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appDelete method with an empty input, deserializing to an object of the specified class.
appDelete(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appDelete method with the given input, deserializing to an object of the specified class.
appDelete(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appDelete method with an empty input using the given environment, deserializing to an object of the specified class.
appDelete(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appDelete method with the given input using the given environment, deserializing to an object of the specified class.
appDelete(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appDelete(String, Class) instead and supply your own class to deserialize to.
appDelete(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appDelete(String, Object, Class) instead and supply your own class to deserialize to.
appDelete(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appDelete(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appDelete(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appDelete(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appDescribe method with an empty input, deserializing to an object of the specified class.
appDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appDescribe method with the given input, deserializing to an object of the specified class.
appDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
appDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appDescribe method with the given input using the given environment, deserializing to an object of the specified class.
appDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appDescribe(String, Class) instead and supply your own class to deserialize to.
appDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appDescribe(String, Object, Class) instead and supply your own class to deserialize to.
appDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appGet(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appGet method with an empty input, deserializing to an object of the specified class.
appGet(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appGet method with the given input, deserializing to an object of the specified class.
appGet(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appGet method with an empty input using the given environment, deserializing to an object of the specified class.
appGet(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appGet method with the given input using the given environment, deserializing to an object of the specified class.
appGet(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appGet(String, Class) instead and supply your own class to deserialize to.
appGet(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appGet(String, Object, Class) instead and supply your own class to deserialize to.
appGet(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appGet(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appGet(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appGet(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appInstall(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appInstall method with an empty input, deserializing to an object of the specified class.
appInstall(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appInstall method with the given input, deserializing to an object of the specified class.
appInstall(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appInstall method with an empty input using the given environment, deserializing to an object of the specified class.
appInstall(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appInstall method with the given input using the given environment, deserializing to an object of the specified class.
appInstall(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appInstall(String, Class) instead and supply your own class to deserialize to.
appInstall(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appInstall(String, Object, Class) instead and supply your own class to deserialize to.
appInstall(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appInstall(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appInstall(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appInstall(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletAddTags method with an empty input, deserializing to an object of the specified class.
appletAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletAddTags method with the given input, deserializing to an object of the specified class.
appletAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
appletAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletAddTags method with the given input using the given environment, deserializing to an object of the specified class.
appletAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletAddTags(String, Class) instead and supply your own class to deserialize to.
appletAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletAddTags(String, Object, Class) instead and supply your own class to deserialize to.
appletAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletDescribe method with an empty input, deserializing to an object of the specified class.
appletDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletDescribe method with the given input, deserializing to an object of the specified class.
appletDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
appletDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletDescribe method with the given input using the given environment, deserializing to an object of the specified class.
appletDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletDescribe(String, Class) instead and supply your own class to deserialize to.
appletDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletDescribe(String, Object, Class) instead and supply your own class to deserialize to.
appletDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletGet(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletGet method with an empty input, deserializing to an object of the specified class.
appletGet(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletGet method with the given input, deserializing to an object of the specified class.
appletGet(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletGet method with an empty input using the given environment, deserializing to an object of the specified class.
appletGet(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletGet method with the given input using the given environment, deserializing to an object of the specified class.
appletGet(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletGet(String, Class) instead and supply your own class to deserialize to.
appletGet(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletGet(String, Object, Class) instead and supply your own class to deserialize to.
appletGet(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletGet(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletGet(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletGet(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletGetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletGetDetails method with an empty input, deserializing to an object of the specified class.
appletGetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletGetDetails method with the given input, deserializing to an object of the specified class.
appletGetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletGetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
appletGetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletGetDetails method with the given input using the given environment, deserializing to an object of the specified class.
appletGetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletGetDetails(String, Class) instead and supply your own class to deserialize to.
appletGetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletGetDetails(String, Object, Class) instead and supply your own class to deserialize to.
appletGetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletGetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletGetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletGetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletListProjects(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletListProjects method with an empty input, deserializing to an object of the specified class.
appletListProjects(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletListProjects method with the given input, deserializing to an object of the specified class.
appletListProjects(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletListProjects method with an empty input using the given environment, deserializing to an object of the specified class.
appletListProjects(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletListProjects method with the given input using the given environment, deserializing to an object of the specified class.
appletListProjects(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletListProjects(String, Class) instead and supply your own class to deserialize to.
appletListProjects(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletListProjects(String, Object, Class) instead and supply your own class to deserialize to.
appletListProjects(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletListProjects(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletListProjects(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletListProjects(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletNew method with an empty input, deserializing to an object of the specified class.
appletNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletNew method with an empty input using the specified environment, deserializing to an object of the specified class.
appletNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletNew method with the specified input, deserializing to an object of the specified class.
appletNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletNew method with the specified input using the specified environment, deserializing to an object of the specified class.
appletNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletNew(Class) instead and supply your own class to deserialize to.
appletNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletNew(Object, Class) instead and supply your own class to deserialize to.
appletNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
appletNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletRemoveTags method with an empty input, deserializing to an object of the specified class.
appletRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletRemoveTags method with the given input, deserializing to an object of the specified class.
appletRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
appletRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
appletRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRemoveTags(String, Class) instead and supply your own class to deserialize to.
appletRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
appletRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletRename(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletRename method with an empty input, deserializing to an object of the specified class.
appletRename(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletRename method with the given input, deserializing to an object of the specified class.
appletRename(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletRename method with an empty input using the given environment, deserializing to an object of the specified class.
appletRename(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletRename method with the given input using the given environment, deserializing to an object of the specified class.
appletRename(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRename(String, Class) instead and supply your own class to deserialize to.
appletRename(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRename(String, Object, Class) instead and supply your own class to deserialize to.
appletRename(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRename(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletRename(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRename(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletRun(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletRun method with an empty input, deserializing to an object of the specified class.
appletRun(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletRun method with the given input, deserializing to an object of the specified class.
appletRun(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletRun method with an empty input using the given environment, deserializing to an object of the specified class.
appletRun(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletRun method with the given input using the given environment, deserializing to an object of the specified class.
appletRun(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRun(String, Class) instead and supply your own class to deserialize to.
appletRun(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRun(String, Object, Class) instead and supply your own class to deserialize to.
appletRun(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRun(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletRun(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletRun(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletSetProperties(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletSetProperties method with an empty input, deserializing to an object of the specified class.
appletSetProperties(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appletSetProperties method with the given input, deserializing to an object of the specified class.
appletSetProperties(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletSetProperties method with an empty input using the given environment, deserializing to an object of the specified class.
appletSetProperties(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appletSetProperties method with the given input using the given environment, deserializing to an object of the specified class.
appletSetProperties(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletSetProperties(String, Class) instead and supply your own class to deserialize to.
appletSetProperties(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletSetProperties(String, Object, Class) instead and supply your own class to deserialize to.
appletSetProperties(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletSetProperties(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appletSetProperties(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appletSetProperties(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appListAuthorizedUsers(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appListAuthorizedUsers method with an empty input, deserializing to an object of the specified class.
appListAuthorizedUsers(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appListAuthorizedUsers method with the given input, deserializing to an object of the specified class.
appListAuthorizedUsers(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appListAuthorizedUsers method with an empty input using the given environment, deserializing to an object of the specified class.
appListAuthorizedUsers(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appListAuthorizedUsers method with the given input using the given environment, deserializing to an object of the specified class.
appListAuthorizedUsers(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListAuthorizedUsers(String, Class) instead and supply your own class to deserialize to.
appListAuthorizedUsers(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListAuthorizedUsers(String, Object, Class) instead and supply your own class to deserialize to.
appListAuthorizedUsers(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListAuthorizedUsers(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appListAuthorizedUsers(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListAuthorizedUsers(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appListCategories(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appListCategories method with an empty input, deserializing to an object of the specified class.
appListCategories(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appListCategories method with the given input, deserializing to an object of the specified class.
appListCategories(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appListCategories method with an empty input using the given environment, deserializing to an object of the specified class.
appListCategories(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appListCategories method with the given input using the given environment, deserializing to an object of the specified class.
appListCategories(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListCategories(String, Class) instead and supply your own class to deserialize to.
appListCategories(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListCategories(String, Object, Class) instead and supply your own class to deserialize to.
appListCategories(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListCategories(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appListCategories(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListCategories(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appListDevelopers(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appListDevelopers method with an empty input, deserializing to an object of the specified class.
appListDevelopers(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appListDevelopers method with the given input, deserializing to an object of the specified class.
appListDevelopers(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appListDevelopers method with an empty input using the given environment, deserializing to an object of the specified class.
appListDevelopers(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appListDevelopers method with the given input using the given environment, deserializing to an object of the specified class.
appListDevelopers(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListDevelopers(String, Class) instead and supply your own class to deserialize to.
appListDevelopers(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListDevelopers(String, Object, Class) instead and supply your own class to deserialize to.
appListDevelopers(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListDevelopers(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appListDevelopers(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appListDevelopers(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appNew method with an empty input, deserializing to an object of the specified class.
appNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appNew method with an empty input using the specified environment, deserializing to an object of the specified class.
appNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appNew method with the specified input, deserializing to an object of the specified class.
appNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appNew method with the specified input using the specified environment, deserializing to an object of the specified class.
appNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appNew(Class) instead and supply your own class to deserialize to.
appNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appNew(Object, Class) instead and supply your own class to deserialize to.
appNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
appNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appPublish(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appPublish method with an empty input, deserializing to an object of the specified class.
appPublish(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appPublish method with the given input, deserializing to an object of the specified class.
appPublish(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appPublish method with an empty input using the given environment, deserializing to an object of the specified class.
appPublish(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appPublish method with the given input using the given environment, deserializing to an object of the specified class.
appPublish(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appPublish(String, Class) instead and supply your own class to deserialize to.
appPublish(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appPublish(String, Object, Class) instead and supply your own class to deserialize to.
appPublish(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appPublish(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appPublish(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appPublish(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRemoveAuthorizedUsers(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveAuthorizedUsers method with an empty input, deserializing to an object of the specified class.
appRemoveAuthorizedUsers(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveAuthorizedUsers method with the given input, deserializing to an object of the specified class.
appRemoveAuthorizedUsers(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveAuthorizedUsers method with an empty input using the given environment, deserializing to an object of the specified class.
appRemoveAuthorizedUsers(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveAuthorizedUsers method with the given input using the given environment, deserializing to an object of the specified class.
appRemoveAuthorizedUsers(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveAuthorizedUsers(String, Class) instead and supply your own class to deserialize to.
appRemoveAuthorizedUsers(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveAuthorizedUsers(String, Object, Class) instead and supply your own class to deserialize to.
appRemoveAuthorizedUsers(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveAuthorizedUsers(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRemoveAuthorizedUsers(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveAuthorizedUsers(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRemoveCategories(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveCategories method with an empty input, deserializing to an object of the specified class.
appRemoveCategories(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveCategories method with the given input, deserializing to an object of the specified class.
appRemoveCategories(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveCategories method with an empty input using the given environment, deserializing to an object of the specified class.
appRemoveCategories(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveCategories method with the given input using the given environment, deserializing to an object of the specified class.
appRemoveCategories(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveCategories(String, Class) instead and supply your own class to deserialize to.
appRemoveCategories(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveCategories(String, Object, Class) instead and supply your own class to deserialize to.
appRemoveCategories(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveCategories(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRemoveCategories(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveCategories(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRemoveDevelopers(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveDevelopers method with an empty input, deserializing to an object of the specified class.
appRemoveDevelopers(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveDevelopers method with the given input, deserializing to an object of the specified class.
appRemoveDevelopers(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveDevelopers method with an empty input using the given environment, deserializing to an object of the specified class.
appRemoveDevelopers(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveDevelopers method with the given input using the given environment, deserializing to an object of the specified class.
appRemoveDevelopers(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveDevelopers(String, Class) instead and supply your own class to deserialize to.
appRemoveDevelopers(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveDevelopers(String, Object, Class) instead and supply your own class to deserialize to.
appRemoveDevelopers(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveDevelopers(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRemoveDevelopers(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveDevelopers(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveTags method with an empty input, deserializing to an object of the specified class.
appRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveTags method with the given input, deserializing to an object of the specified class.
appRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
appRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
appRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveTags(String, Class) instead and supply your own class to deserialize to.
appRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
appRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRun(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRun method with an empty input, deserializing to an object of the specified class.
appRun(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appRun method with the given input, deserializing to an object of the specified class.
appRun(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRun method with an empty input using the given environment, deserializing to an object of the specified class.
appRun(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appRun method with the given input using the given environment, deserializing to an object of the specified class.
appRun(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRun(String, Class) instead and supply your own class to deserialize to.
appRun(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRun(String, Object, Class) instead and supply your own class to deserialize to.
appRun(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRun(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appRun(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appRun(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appUninstall(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appUninstall method with an empty input, deserializing to an object of the specified class.
appUninstall(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appUninstall method with the given input, deserializing to an object of the specified class.
appUninstall(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appUninstall method with an empty input using the given environment, deserializing to an object of the specified class.
appUninstall(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appUninstall method with the given input using the given environment, deserializing to an object of the specified class.
appUninstall(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appUninstall(String, Class) instead and supply your own class to deserialize to.
appUninstall(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appUninstall(String, Object, Class) instead and supply your own class to deserialize to.
appUninstall(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appUninstall(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appUninstall(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appUninstall(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
appUpdate(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appUpdate method with an empty input, deserializing to an object of the specified class.
appUpdate(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the appUpdate method with the given input, deserializing to an object of the specified class.
appUpdate(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appUpdate method with an empty input using the given environment, deserializing to an object of the specified class.
appUpdate(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the appUpdate method with the given input using the given environment, deserializing to an object of the specified class.
appUpdate(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appUpdate(String, Class) instead and supply your own class to deserialize to.
appUpdate(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appUpdate(String, Object, Class) instead and supply your own class to deserialize to.
appUpdate(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appUpdate(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
appUpdate(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.appUpdate(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
asList() - Method in interface com.dnanexus.DXSearch.ObjectProducer
Returns a list of the matching items.

B

billTo - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
build() - Method in class com.dnanexus.DXApplet.Builder
Creates the applet.
build() - Method in class com.dnanexus.DXDataObject.Builder
Creates the new data object.
build() - Method in class com.dnanexus.DXEnvironment.Builder
Build the DXEnvironment from the settings configured so far.
build() - Method in class com.dnanexus.DXFile.Builder
Creates the file.
build() - Method in class com.dnanexus.DXJSON.ArrayBuilder
Generates a JSON array.
build() - Method in class com.dnanexus.DXJSON.ObjectBuilder
Generates a JSON object.
build() - Method in class com.dnanexus.DXProject.Builder
Creates the project.
build() - Method in class com.dnanexus.DXRecord.Builder
Creates the record.
build() - Method in class com.dnanexus.DXWorkflow.Builder
Creates the workflow.
build() - Method in class com.dnanexus.InputParameter.Builder
Builds the input parameter object.
build() - Method in class com.dnanexus.OutputParameter.Builder
Builds the output parameter object.
build() - Method in class com.dnanexus.RunSpecification.Builder
Creates the run specification.

C

cachedDescribe - Variable in class com.dnanexus.DXDataObject
 
cachedDescribe - Variable in class com.dnanexus.DXExecution
 
checkAndFixParameters() - Method in class com.dnanexus.DXApplet.Builder
Ensures that the project was either explicitly set or that the environment specifies a workspace, and that the run specification is provided.
checkAndFixParameters() - Method in class com.dnanexus.DXDataObject.Builder
Ensures that the project was either explicitly set or that the environment specifies a workspace.
checkCachedDescribeAvailable() - Method in class com.dnanexus.DXDataObject
Verifies that this object carries cached describe data.
checkCachedDescribeAvailable() - Method in class com.dnanexus.DXExecution
Verifies that this object carries cached describe data.
checkDXLinkFormat(Map<String, Object>) - Static method in class com.dnanexus.DXDataObject
Verifies that the specified map has the format of a DNAnexus link.
close() - Method in class com.dnanexus.DXDataObject
Closes the data object.
close() - Method in class com.dnanexus.DXFile
 
close() - Method in class com.dnanexus.DXGTable
Deprecated.
 
close() - Method in class com.dnanexus.DXRecord
 
close() - Method in class com.dnanexus.DXWorkflow
 
closeAndWait() - Method in class com.dnanexus.DXDataObject
Closes the data object and waits until the close operation is complete.
closeAndWait() - Method in class com.dnanexus.DXFile
 
closeAndWait() - Method in class com.dnanexus.DXGTable
Deprecated.
 
closeAndWait() - Method in class com.dnanexus.DXRecord
 
closeAndWait() - Method in class com.dnanexus.DXWorkflow
 
ColumnSpecification - Class in com.dnanexus
A single column in a GTable column schema.
ColumnType - Enum in com.dnanexus
The type of a column in a GTable.
com.dnanexus - package com.dnanexus
Provides low- and high-level bindings to the DNAnexus Platform.
com.dnanexus.exceptions - package com.dnanexus.exceptions
Exception classes that may be thrown by DNAnexus API calls.
containerClone(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerClone method with an empty input, deserializing to an object of the specified class.
containerClone(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerClone method with the given input, deserializing to an object of the specified class.
containerClone(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerClone method with an empty input using the given environment, deserializing to an object of the specified class.
containerClone(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerClone method with the given input using the given environment, deserializing to an object of the specified class.
containerClone(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerClone(String, Class) instead and supply your own class to deserialize to.
containerClone(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerClone(String, Object, Class) instead and supply your own class to deserialize to.
containerClone(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerClone(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerClone(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerClone(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerDescribe method with an empty input, deserializing to an object of the specified class.
containerDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerDescribe method with the given input, deserializing to an object of the specified class.
containerDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
containerDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerDescribe method with the given input using the given environment, deserializing to an object of the specified class.
containerDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerDescribe(String, Class) instead and supply your own class to deserialize to.
containerDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerDescribe(String, Object, Class) instead and supply your own class to deserialize to.
containerDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerDestroy(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerDestroy method with an empty input, deserializing to an object of the specified class.
containerDestroy(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerDestroy method with the given input, deserializing to an object of the specified class.
containerDestroy(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerDestroy method with an empty input using the given environment, deserializing to an object of the specified class.
containerDestroy(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerDestroy method with the given input using the given environment, deserializing to an object of the specified class.
containerDestroy(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerDestroy(String, Class) instead and supply your own class to deserialize to.
containerDestroy(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerDestroy(String, Object, Class) instead and supply your own class to deserialize to.
containerDestroy(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerDestroy(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerDestroy(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerDestroy(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerListFolder(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerListFolder method with an empty input, deserializing to an object of the specified class.
containerListFolder(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerListFolder method with the given input, deserializing to an object of the specified class.
containerListFolder(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerListFolder method with an empty input using the given environment, deserializing to an object of the specified class.
containerListFolder(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerListFolder method with the given input using the given environment, deserializing to an object of the specified class.
containerListFolder(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerListFolder(String, Class) instead and supply your own class to deserialize to.
containerListFolder(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerListFolder(String, Object, Class) instead and supply your own class to deserialize to.
containerListFolder(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerListFolder(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerListFolder(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerListFolder(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerMove(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerMove method with an empty input, deserializing to an object of the specified class.
containerMove(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerMove method with the given input, deserializing to an object of the specified class.
containerMove(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerMove method with an empty input using the given environment, deserializing to an object of the specified class.
containerMove(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerMove method with the given input using the given environment, deserializing to an object of the specified class.
containerMove(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerMove(String, Class) instead and supply your own class to deserialize to.
containerMove(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerMove(String, Object, Class) instead and supply your own class to deserialize to.
containerMove(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerMove(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerMove(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerMove(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerNewFolder(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerNewFolder method with an empty input, deserializing to an object of the specified class.
containerNewFolder(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerNewFolder method with the given input, deserializing to an object of the specified class.
containerNewFolder(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerNewFolder method with an empty input using the given environment, deserializing to an object of the specified class.
containerNewFolder(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerNewFolder method with the given input using the given environment, deserializing to an object of the specified class.
containerNewFolder(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerNewFolder(String, Class) instead and supply your own class to deserialize to.
containerNewFolder(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerNewFolder(String, Object, Class) instead and supply your own class to deserialize to.
containerNewFolder(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerNewFolder(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerNewFolder(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerNewFolder(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerRemoveFolder(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerRemoveFolder method with an empty input, deserializing to an object of the specified class.
containerRemoveFolder(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerRemoveFolder method with the given input, deserializing to an object of the specified class.
containerRemoveFolder(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerRemoveFolder method with an empty input using the given environment, deserializing to an object of the specified class.
containerRemoveFolder(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerRemoveFolder method with the given input using the given environment, deserializing to an object of the specified class.
containerRemoveFolder(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRemoveFolder(String, Class) instead and supply your own class to deserialize to.
containerRemoveFolder(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRemoveFolder(String, Object, Class) instead and supply your own class to deserialize to.
containerRemoveFolder(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRemoveFolder(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerRemoveFolder(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRemoveFolder(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerRemoveObjects(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerRemoveObjects method with an empty input, deserializing to an object of the specified class.
containerRemoveObjects(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerRemoveObjects method with the given input, deserializing to an object of the specified class.
containerRemoveObjects(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerRemoveObjects method with an empty input using the given environment, deserializing to an object of the specified class.
containerRemoveObjects(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerRemoveObjects method with the given input using the given environment, deserializing to an object of the specified class.
containerRemoveObjects(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRemoveObjects(String, Class) instead and supply your own class to deserialize to.
containerRemoveObjects(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRemoveObjects(String, Object, Class) instead and supply your own class to deserialize to.
containerRemoveObjects(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRemoveObjects(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerRemoveObjects(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRemoveObjects(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerRenameFolder(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerRenameFolder method with an empty input, deserializing to an object of the specified class.
containerRenameFolder(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the containerRenameFolder method with the given input, deserializing to an object of the specified class.
containerRenameFolder(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerRenameFolder method with an empty input using the given environment, deserializing to an object of the specified class.
containerRenameFolder(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the containerRenameFolder method with the given input using the given environment, deserializing to an object of the specified class.
containerRenameFolder(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRenameFolder(String, Class) instead and supply your own class to deserialize to.
containerRenameFolder(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRenameFolder(String, Object, Class) instead and supply your own class to deserialize to.
containerRenameFolder(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRenameFolder(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
containerRenameFolder(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.containerRenameFolder(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
create() - Static method in class com.dnanexus.DXEnvironment
Creates a DXEnvironment from the default settings.
created - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
createdAfter(Date) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects that were created after the specified time.
createdAfter(Date) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only return executions created after the specified date.
createdBefore(Date) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects that were created before the specified time.
createdBefore(Date) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only return executions created before the specified date.
createParents - Variable in class com.dnanexus.DXDataObject.Builder
 

D

DataObjectState - Enum in com.dnanexus
The state of a data object.
delayWorkspaceDestruction - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
delayWorkspaceDestruction() - Method in class com.dnanexus.ExecutableRunner
Delays the destruction of the workspace of the resulting job so it can be examined for debugging.
dependsOn(DXDataObject) - Method in class com.dnanexus.ExecutableRunner
Makes the resulting execution depend on the specified data object, so that the execution will not begin until the data object is closed.
dependsOn(DXExecution) - Method in class com.dnanexus.ExecutableRunner
Makes the resulting execution depend on the specified execution, so that the former will not begin until the latter has successfully completed.
describe() - Method in class com.dnanexus.DXAnalysis
 
describe() - Method in class com.dnanexus.DXApplet
 
describe(DXDataObject.DescribeOptions) - Method in class com.dnanexus.DXApplet
 
describe() - Method in class com.dnanexus.DXDataObject
Returns metadata about the data object.
describe(DXDataObject.DescribeOptions) - Method in class com.dnanexus.DXDataObject
Returns metadata about the data object, specifying which optional fields are to be returned and what project to obtain project-specific metadata from.
describe() - Method in class com.dnanexus.DXExecution
Obtains metadata about the execution.
describe() - Method in class com.dnanexus.DXFile
 
describe(DXDataObject.DescribeOptions) - Method in class com.dnanexus.DXFile
 
describe() - Method in class com.dnanexus.DXGTable
Deprecated.
 
describe(DXDataObject.DescribeOptions) - Method in class com.dnanexus.DXGTable
Deprecated.
 
describe() - Method in class com.dnanexus.DXJob
 
describe() - Method in class com.dnanexus.DXProject
Returns metadata about the project.
describe() - Method in class com.dnanexus.DXRecord
 
describe(DXDataObject.DescribeOptions) - Method in class com.dnanexus.DXRecord
 
describe() - Method in class com.dnanexus.DXWorkflow
 
describe(DXDataObject.DescribeOptions) - Method in class com.dnanexus.DXWorkflow
 
destroy() - Method in class com.dnanexus.DXProject
Destroys the project and all its contents.
destroy(boolean) - Method in class com.dnanexus.DXProject
Destroys the project and all its contents, optionally terminating all running jobs.
details - Variable in class com.dnanexus.DXDataObject.Builder
 
details - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
disableRetry() - Method in class com.dnanexus.DXEnvironment.Builder
Disables automatic retry of HTTP requests.
downloadBytes() - Method in class com.dnanexus.DXFile
Downloads the entire file into a byte array.
downloadBytes(long, long) - Method in class com.dnanexus.DXFile
Downloads the specified byte range of the file into a byte array.
downloadToOutputStream(OutputStream) - Method in class com.dnanexus.DXFile
Downloads the entire file and writes the data to an OutputStream.
downloadToOutputStream(OutputStream, long, long) - Method in class com.dnanexus.DXFile
Downloads the specified byte range of the file into an OutputStream.
DXAnalysis - Class in com.dnanexus
An analysis object (a specific instantiation of a workflow).
DXAnalysis.Describe - Class in com.dnanexus
Contains metadata about an analysis.
DXAPI - Class in com.dnanexus
Utility class containing low-level wrappers for invoking DNAnexus API methods.
DXAPIException - Exception in com.dnanexus.exceptions
Represents any response from the API server other than HTTP code 200 (OK).
DXAPIException(String, int) - Constructor for exception com.dnanexus.exceptions.DXAPIException
Initializes a new exception with the specified message and HTTP status code.
DXApplet - Class in com.dnanexus
An applet (an executable data object).
DXApplet.Builder - Class in com.dnanexus
Builder class for creating a new DXApplet object.
DXApplet.Describe - Class in com.dnanexus
Contains metadata for an applet.
DXContainer - Class in com.dnanexus
A container (a logical collection for storage and organization of data).
DXContainer.FolderContents - Class in com.dnanexus
Represents the contents of a folder.
DXDataObject - Class in com.dnanexus
Base class for all data object classes in the DNAnexus Platform.
DXDataObject(String, String, DXContainer, DXEnvironment, JsonNode) - Constructor for class com.dnanexus.DXDataObject
Initializes the DXDataObject to point to the object with the specified ID in the specified project.
DXDataObject(String, String, DXEnvironment, JsonNode) - Constructor for class com.dnanexus.DXDataObject
Initializes the DXDataObject to point to the object with the specified ID in the environment's workspace.
DXDataObject.Builder<T extends DXDataObject.Builder<T,U>,U extends DXDataObject> - Class in com.dnanexus
Abstract builder class for creating a new data object of class U.
DXDataObject.Builder() - Constructor for class com.dnanexus.DXDataObject.Builder
 
DXDataObject.Builder(DXEnvironment) - Constructor for class com.dnanexus.DXDataObject.Builder
 
DXDataObject.Describe - Class in com.dnanexus
Contains metadata for a data object (fields common to all data objects).
DXDataObject.Describe() - Constructor for class com.dnanexus.DXDataObject.Describe
Creates a Describe object with all empty metadata.
DXDataObject.DescribeOptions - Class in com.dnanexus
Configuration options for a describe call on a data object (e.g. DXDataObject.describe(DescribeOptions)) to control what optional fields get returned and what project to obtain project-specific metadata from.
DXEnvironment - Class in com.dnanexus
Immutable class storing configuration for selecting, authenticating to, and communicating with a DNAnexus API server.
DXEnvironment.Builder - Class in com.dnanexus
Builder class for creating DXEnvironment objects.
DXEnvironment.Builder() - Constructor for class com.dnanexus.DXEnvironment.Builder
Deprecated.
DXExecutable<T extends DXExecution> - Interface in com.dnanexus
An executable (applet, app, or workflow).
DXExecution - Class in com.dnanexus
An execution (job or analysis).
DXExecution(String, String, DXEnvironment) - Constructor for class com.dnanexus.DXExecution
Initializes a new execution with the specified execution ID and environment.
DXExecution(String, String, DXEnvironment, JsonNode) - Constructor for class com.dnanexus.DXExecution
Initializes a new execution with the specified execution ID, environment, and cached describe data.
DXExecution.Describe - Class in com.dnanexus
Contains metadata about an execution.
DXExecution.DescribeResponseHash - Class in com.dnanexus
Deserialized output from the /analysis-xxxx/describe or /job-xxxx/describe route (fields common to all executions only).
DXExecution.DescribeResponseHash() - Constructor for class com.dnanexus.DXExecution.DescribeResponseHash
 
DXFile - Class in com.dnanexus
A file (an opaque sequence of bytes).
DXFile.Builder - Class in com.dnanexus
Builder class for creating a new DXFile object.
DXFile.Describe - Class in com.dnanexus
Contains metadata for a file.
DXGTable - Class in com.dnanexus
Deprecated.
DXGTable.Describe - Class in com.dnanexus
Deprecated.
Contains metadata for a GTable.
DXHTTPException - Exception in com.dnanexus.exceptions
Represents an error encountered while making an HTTP request or parsing its results.
DXHTTPException(Throwable) - Constructor for exception com.dnanexus.exceptions.DXHTTPException
Initializes a new DXHTTPException with the specified cause.
DXHTTPException() - Constructor for exception com.dnanexus.exceptions.DXHTTPException
Initializes a new DXHTTPException.
DXHTTPRequest - Class in com.dnanexus
Class for making a raw DNAnexus API call via HTTP.
DXHTTPRequest() - Constructor for class com.dnanexus.DXHTTPRequest
Construct the DXHTTPRequest using the default DXEnvironment.
DXHTTPRequest(DXEnvironment) - Constructor for class com.dnanexus.DXHTTPRequest
Construct the DXHTTPRequest using the given DXEnvironment.
DXHTTPRequest.RetryStrategy - Enum in com.dnanexus
Indicates whether a particular API request can be retried.
dxId - Variable in class com.dnanexus.DXObject
The ID of this object (this is the base for URLs used in API calls, /object-id/verb).
DXJob - Class in com.dnanexus
A job object (a specific instantiation of an app or applet).
DXJob.Describe - Class in com.dnanexus
Contains metadata about a job.
DXJob.StateTransition - Class in com.dnanexus
A event where a job transitioned from one state to another.
DXJSON - Class in com.dnanexus
Utility class for working with JSON objects.
DXJSON.ArrayBuilder - Class in com.dnanexus
Builder class that generates a JSON array.
DXJSON.ArrayBuilder() - Constructor for class com.dnanexus.DXJSON.ArrayBuilder
Initializes an ArrayBuilder which will generate an empty array.
DXJSON.ObjectBuilder - Class in com.dnanexus
Builder class that generates a JSON object (hash).
DXJSON.ObjectBuilder() - Constructor for class com.dnanexus.DXJSON.ObjectBuilder
Initializes an ObjectBuilder which will generate an empty object.
DXObject - Class in com.dnanexus
Base class for all objects in the DNAnexus Platform.
DXObject(String, String, DXEnvironment) - Constructor for class com.dnanexus.DXObject
Creates a new object with the specified ID and environment.
DXProject - Class in com.dnanexus
A project (a container providing features for data sharing and collaboration).
DXProject.Builder - Class in com.dnanexus
Builder class for creating a new DXProject object.
DXProject.Describe - Class in com.dnanexus
Contains metadata for a project.
DXRecord - Class in com.dnanexus
A record (the minimal data object class).
DXRecord.Builder - Class in com.dnanexus
Builder class for creating a new DXRecord object.
DXRecord.Describe - Class in com.dnanexus
Contains metadata for a record.
DXSearch - Class in com.dnanexus
Utility class containing methods for searching for platform objects by various criteria.
DXSearch.FindDataObjectsRequestBuilder<T extends DXDataObject> - Class in com.dnanexus
Builder class for formulating findDataObjects queries and executing them.
DXSearch.FindDataObjectsResult<T extends DXDataObject> - Class in com.dnanexus
The set of data objects that matched a findDataObjects query.
DXSearch.FindExecutionsRequestBuilder<T extends DXExecution> - Class in com.dnanexus
Builder class for formulating findExecutions queries and executing them.
DXSearch.FindExecutionsResult<T extends DXExecution> - Class in com.dnanexus
The set of executions that matched a findExecutions query.
DXSearch.FindResultPage<T> - Interface in com.dnanexus
Represents a single page of results for a find route.
DXSearch.ObjectProducer<T extends DXObject> - Interface in com.dnanexus
Interface that provides streaming or buffered access to a sequence of DXObjects.
DXSearch.PropertiesQuery - Class in com.dnanexus
A query for objects (data objects, executions, or projects) with specified properties.
DXSearch.TagsQuery - Class in com.dnanexus
A query for objects (data objects, executions, or projects) with specified tags.
DXSearch.TypeQuery - Class in com.dnanexus
A query for data objects with specified types.
DXSearch.VisibilityQuery - Enum in com.dnanexus
Specifies in a query whether to return visible items, hidden items, or both.
DXUtil - Class in com.dnanexus
Utility class for handling job input and output.
DXUtil() - Constructor for class com.dnanexus.DXUtil
 
DXWorkflow - Class in com.dnanexus
A workflow.
DXWorkflow.Builder - Class in com.dnanexus
Builder class for creating a new DXWorkflow object.
DXWorkflow.Describe - Class in com.dnanexus
Contains metadata for a workflow.
DXWorkflow.Modification<T> - Class in com.dnanexus
Represents the result of a workflow-modifying operation, along with the workflow's edit version after that operation.
DXWorkflow.Stage - Class in com.dnanexus
A workflow stage.

E

env - Variable in class com.dnanexus.DXDataObject.Builder
 
env - Variable in class com.dnanexus.DXExecution.Describe
 
env - Variable in class com.dnanexus.DXObject
Environment object to use for API calls.
env - Variable in class com.dnanexus.ExecutableRunner
 
equals(Object) - Method in class com.dnanexus.ColumnSpecification
 
equals(Object) - Method in class com.dnanexus.DXDataObject
 
equals(Object) - Method in class com.dnanexus.DXJob.StateTransition
 
equals(Object) - Method in class com.dnanexus.DXObject
 
executableId - Variable in class com.dnanexus.ExecutableRunner
 
executableName - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
ExecutableRunner<T extends DXExecution> - Class in com.dnanexus
Collects parameters for a new run of an executable.
execute() - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Executes the query.
execute(int) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Executes the query with the specified page size.
execute() - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Executes the query.
execute(int) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Executes the query with the specified page size.

F

fileAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileAddTags method with an empty input, deserializing to an object of the specified class.
fileAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileAddTags method with the given input, deserializing to an object of the specified class.
fileAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
fileAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileAddTags method with the given input using the given environment, deserializing to an object of the specified class.
fileAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileAddTags(String, Class) instead and supply your own class to deserialize to.
fileAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileAddTags(String, Object, Class) instead and supply your own class to deserialize to.
fileAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileAddTypes(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileAddTypes method with an empty input, deserializing to an object of the specified class.
fileAddTypes(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileAddTypes method with the given input, deserializing to an object of the specified class.
fileAddTypes(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileAddTypes method with an empty input using the given environment, deserializing to an object of the specified class.
fileAddTypes(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileAddTypes method with the given input using the given environment, deserializing to an object of the specified class.
fileAddTypes(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileAddTypes(String, Class) instead and supply your own class to deserialize to.
fileAddTypes(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileAddTypes(String, Object, Class) instead and supply your own class to deserialize to.
fileAddTypes(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileAddTypes(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileAddTypes(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileAddTypes(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileClose(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileClose method with an empty input, deserializing to an object of the specified class.
fileClose(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileClose method with the given input, deserializing to an object of the specified class.
fileClose(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileClose method with an empty input using the given environment, deserializing to an object of the specified class.
fileClose(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileClose method with the given input using the given environment, deserializing to an object of the specified class.
fileClose(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileClose(String, Class) instead and supply your own class to deserialize to.
fileClose(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileClose(String, Object, Class) instead and supply your own class to deserialize to.
fileClose(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileClose(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileClose(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileClose(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileDescribe method with an empty input, deserializing to an object of the specified class.
fileDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileDescribe method with the given input, deserializing to an object of the specified class.
fileDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
fileDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileDescribe method with the given input using the given environment, deserializing to an object of the specified class.
fileDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileDescribe(String, Class) instead and supply your own class to deserialize to.
fileDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileDescribe(String, Object, Class) instead and supply your own class to deserialize to.
fileDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileDownload(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileDownload method with an empty input, deserializing to an object of the specified class.
fileDownload(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileDownload method with the given input, deserializing to an object of the specified class.
fileDownload(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileDownload method with an empty input using the given environment, deserializing to an object of the specified class.
fileDownload(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileDownload method with the given input using the given environment, deserializing to an object of the specified class.
fileDownload(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileDownload(String, Class) instead and supply your own class to deserialize to.
fileDownload(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileDownload(String, Object, Class) instead and supply your own class to deserialize to.
fileDownload(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileDownload(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileDownload(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileDownload(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileGetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileGetDetails method with an empty input, deserializing to an object of the specified class.
fileGetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileGetDetails method with the given input, deserializing to an object of the specified class.
fileGetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileGetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
fileGetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileGetDetails method with the given input using the given environment, deserializing to an object of the specified class.
fileGetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileGetDetails(String, Class) instead and supply your own class to deserialize to.
fileGetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileGetDetails(String, Object, Class) instead and supply your own class to deserialize to.
fileGetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileGetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileGetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileGetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileListProjects(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileListProjects method with an empty input, deserializing to an object of the specified class.
fileListProjects(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileListProjects method with the given input, deserializing to an object of the specified class.
fileListProjects(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileListProjects method with an empty input using the given environment, deserializing to an object of the specified class.
fileListProjects(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileListProjects method with the given input using the given environment, deserializing to an object of the specified class.
fileListProjects(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileListProjects(String, Class) instead and supply your own class to deserialize to.
fileListProjects(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileListProjects(String, Object, Class) instead and supply your own class to deserialize to.
fileListProjects(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileListProjects(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileListProjects(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileListProjects(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileNew method with an empty input, deserializing to an object of the specified class.
fileNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileNew method with an empty input using the specified environment, deserializing to an object of the specified class.
fileNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileNew method with the specified input, deserializing to an object of the specified class.
fileNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileNew method with the specified input using the specified environment, deserializing to an object of the specified class.
fileNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileNew(Class) instead and supply your own class to deserialize to.
fileNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileNew(Object, Class) instead and supply your own class to deserialize to.
fileNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
fileNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileRemoveTags method with an empty input, deserializing to an object of the specified class.
fileRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileRemoveTags method with the given input, deserializing to an object of the specified class.
fileRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
fileRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
fileRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRemoveTags(String, Class) instead and supply your own class to deserialize to.
fileRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
fileRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileRemoveTypes(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileRemoveTypes method with an empty input, deserializing to an object of the specified class.
fileRemoveTypes(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileRemoveTypes method with the given input, deserializing to an object of the specified class.
fileRemoveTypes(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileRemoveTypes method with an empty input using the given environment, deserializing to an object of the specified class.
fileRemoveTypes(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileRemoveTypes method with the given input using the given environment, deserializing to an object of the specified class.
fileRemoveTypes(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRemoveTypes(String, Class) instead and supply your own class to deserialize to.
fileRemoveTypes(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRemoveTypes(String, Object, Class) instead and supply your own class to deserialize to.
fileRemoveTypes(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRemoveTypes(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileRemoveTypes(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRemoveTypes(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileRename(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileRename method with an empty input, deserializing to an object of the specified class.
fileRename(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileRename method with the given input, deserializing to an object of the specified class.
fileRename(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileRename method with an empty input using the given environment, deserializing to an object of the specified class.
fileRename(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileRename method with the given input using the given environment, deserializing to an object of the specified class.
fileRename(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRename(String, Class) instead and supply your own class to deserialize to.
fileRename(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRename(String, Object, Class) instead and supply your own class to deserialize to.
fileRename(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRename(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileRename(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileRename(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileSetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetDetails method with an empty input, deserializing to an object of the specified class.
fileSetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetDetails method with the given input, deserializing to an object of the specified class.
fileSetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
fileSetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetDetails method with the given input using the given environment, deserializing to an object of the specified class.
fileSetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetDetails(String, Class) instead and supply your own class to deserialize to.
fileSetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetDetails(String, Object, Class) instead and supply your own class to deserialize to.
fileSetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileSetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileSetProperties(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetProperties method with an empty input, deserializing to an object of the specified class.
fileSetProperties(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetProperties method with the given input, deserializing to an object of the specified class.
fileSetProperties(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetProperties method with an empty input using the given environment, deserializing to an object of the specified class.
fileSetProperties(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetProperties method with the given input using the given environment, deserializing to an object of the specified class.
fileSetProperties(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetProperties(String, Class) instead and supply your own class to deserialize to.
fileSetProperties(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetProperties(String, Object, Class) instead and supply your own class to deserialize to.
fileSetProperties(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetProperties(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileSetProperties(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetProperties(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileSetVisibility(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetVisibility method with an empty input, deserializing to an object of the specified class.
fileSetVisibility(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetVisibility method with the given input, deserializing to an object of the specified class.
fileSetVisibility(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetVisibility method with an empty input using the given environment, deserializing to an object of the specified class.
fileSetVisibility(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileSetVisibility method with the given input using the given environment, deserializing to an object of the specified class.
fileSetVisibility(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetVisibility(String, Class) instead and supply your own class to deserialize to.
fileSetVisibility(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetVisibility(String, Object, Class) instead and supply your own class to deserialize to.
fileSetVisibility(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetVisibility(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileSetVisibility(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileSetVisibility(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileUpload(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileUpload method with an empty input, deserializing to an object of the specified class.
fileUpload(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the fileUpload method with the given input, deserializing to an object of the specified class.
fileUpload(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileUpload method with an empty input using the given environment, deserializing to an object of the specified class.
fileUpload(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the fileUpload method with the given input using the given environment, deserializing to an object of the specified class.
fileUpload(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileUpload(String, Class) instead and supply your own class to deserialize to.
fileUpload(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileUpload(String, Object, Class) instead and supply your own class to deserialize to.
fileUpload(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileUpload(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
fileUpload(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.fileUpload(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
findDataObjects() - Static method in class com.dnanexus.DXSearch
Returns a builder object for finding data objects that match certain criteria.
findDataObjectsWithEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXSearch
Returns a builder object for finding data objects that match certain criteria, using the specified environment.
findExecutions() - Static method in class com.dnanexus.DXSearch
Returns a builder object for finding executions (jobs or analyses) that match certain criteria.
findExecutionsWithEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXSearch
Returns a builder object for finding executions that match certain criteria, using the specified environment.
findJobs() - Static method in class com.dnanexus.DXSearch
findJobsWithEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXSearch
folder - Variable in class com.dnanexus.DXDataObject.Builder
 
folder - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
fromDefaults() - Static method in class com.dnanexus.DXEnvironment.Builder
Creates a Builder object using the JSON config in the file ~/.dnanexus_config/environment.json.
fromEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXEnvironment.Builder
Creates a Builder object with initial settings copied from the specified environment.
fromFile(File) - Static method in class com.dnanexus.DXEnvironment.Builder
Creates a Builder object using the JSON config in the specified file.

G

get() - Static method in class com.dnanexus.DXDataObject.DescribeOptions
Returns a default instance of DescribeOptions that returns no optional fields and selects the project arbitrarily.
getAnalysis() - Method in class com.dnanexus.DXExecution.Describe
Returns the analysis that this execution was run as a stage of, or null if this execution was not run as a stage in an analysis.
getApiserverPath() - Method in class com.dnanexus.DXEnvironment
Returns the fully qualified API server address (including protocol, host, and port).
getApplet() - Method in class com.dnanexus.DXJob.Describe
Returns the applet of the job if it is running an applet, or null otherwise.
getArrayBuilder() - Static method in class com.dnanexus.DXJSON
Creates a new ArrayBuilder, initialized to produce an empty array.
getBillTo() - Method in class com.dnanexus.DXExecution.Describe
Returns the user or organization that this execution was billed to.
getByteSize() - Method in class com.dnanexus.DXGTable.Describe
Deprecated.
Returns the number of bytes of storage consumed by the GTable.
getCachedDescribe() - Method in class com.dnanexus.DXAnalysis
 
getCachedDescribe() - Method in class com.dnanexus.DXApplet
 
getCachedDescribe() - Method in class com.dnanexus.DXDataObject
Returns metadata about the data object, like DXDataObject.describe(), but without making an API call.
getCachedDescribe() - Method in class com.dnanexus.DXExecution
Returns metadata about the data object, like DXExecution.describe(), but without making an API call.
getCachedDescribe() - Method in class com.dnanexus.DXFile
 
getCachedDescribe() - Method in class com.dnanexus.DXGTable
Deprecated.
 
getCachedDescribe() - Method in class com.dnanexus.DXJob
 
getCachedDescribe() - Method in class com.dnanexus.DXRecord
 
getCachedDescribe() - Method in class com.dnanexus.DXWorkflow
 
getChunkSize(int) - Method in class com.dnanexus.DXFile.Describe
Returns the size the specified file part in bytes.
getCode() - Method in class com.dnanexus.RunSpecification
Returns the entry point code for the applet.
getColumns() - Method in class com.dnanexus.DXGTable.Describe
Deprecated.
Returns the columns of the GTable.
getCreationDate() - Method in class com.dnanexus.DXDataObject.Describe
Returns the creation date of the object.
getCreationDate() - Method in class com.dnanexus.DXExecution.Describe
Returns the date at which the execution was created.
getDescription() - Method in class com.dnanexus.DXApplet.Describe
Returns the applet description.
getDetails(Class<T>) - Method in class com.dnanexus.DXDataObject.Describe
Returns the details of the object.
getDetails(Class<T>) - Method in class com.dnanexus.DXExecution.Describe
Returns the details (user-suppled metadata) of the execution, deserialized to the specified class.
getDownloadStream() - Method in class com.dnanexus.DXFile
Returns a stream of the file's contents.
getDownloadStream(long, long) - Method in class com.dnanexus.DXFile
Returns a stream of the specified byte range of the file's contents.
getDXAPIVersion() - Method in class com.dnanexus.DXApplet.Describe
Returns the API version that the applet code is to run under.
getEditVersion() - Method in class com.dnanexus.DXWorkflow.Modification
 
getExecutableName() - Method in class com.dnanexus.DXExecution.Describe
Returns the name of the executable that was run to create this execution.
getFailureMessage() - Method in class com.dnanexus.DXJob.Describe
Returns a detailed message describing why the job failed, or null if the job is not in a failing or failed state.
getFailureReason() - Method in class com.dnanexus.DXJob.Describe
Returns a short String describing why the job failed, or null if the job is not in a failing or failed state.
getFilePartsList() - Method in class com.dnanexus.DXFile.Describe
Returns a list of indices corresponding to parts of the file
getFirstPage(int) - Method in class com.dnanexus.DXSearch.FindDataObjectsResult
Returns a first page of the findDataObjects results.
getFolder() - Method in class com.dnanexus.DXDataObject.Describe
Returns the folder that contains the object.
getFolder() - Method in class com.dnanexus.DXExecution.Describe
Returns the output folder of the execution.
getFunction() - Method in class com.dnanexus.DXJob.Describe
Returns the name of the function (entry point) that the job is running.
getId() - Method in interface com.dnanexus.DXExecutable
Returns the ID of the object.
getId() - Method in class com.dnanexus.DXExecution.Describe
Returns the ID of the execution.
getId() - Method in class com.dnanexus.DXObject
Returns the ID of the object.
getId() - Method in class com.dnanexus.DXWorkflow.Stage
 
getInput(Class<T>) - Method in class com.dnanexus.DXExecution.Describe
Returns the execution's input as it will be given to the job (to the extent possible), deserialized to the specified class.
getInputReference(String) - Method in class com.dnanexus.DXWorkflow.Stage
Create a link to an input field.
getInputSpecification() - Method in class com.dnanexus.DXApplet.Describe
Returns the applet's input specification.
getInstance(String, ColumnType) - Static method in class com.dnanexus.ColumnSpecification
Returns a column specification with the given column name and column type.
getInstance(String) - Static method in class com.dnanexus.DXAnalysis
Returns a DXAnalysis representing the specified analysis.
getInstance(String) - Static method in class com.dnanexus.DXApplet
Returns a DXApplet associated with an existing applet.
getInstance(String, DXContainer) - Static method in class com.dnanexus.DXApplet
Returns a DXApplet associated with an existing applet in a particular project or container.
getInstance(String) - Static method in class com.dnanexus.DXContainer
Returns a DXProject or DXContainer associated with an existing project or container.
getInstance(String) - Static method in class com.dnanexus.DXDataObject
Returns a DXDataObject corresponding to an existing object with the specified ID.
getInstance(String, DXContainer) - Static method in class com.dnanexus.DXDataObject
Returns a DXDataObject corresponding to an existing object with the specified ID in the specified project or container.
getInstance(String) - Static method in class com.dnanexus.DXExecution
Returns a DXExecution corresponding to an existing execution with the specified ID.
getInstance(String) - Static method in class com.dnanexus.DXFile
Returns a DXFile associated with an existing file.
getInstance(String, DXContainer) - Static method in class com.dnanexus.DXFile
Returns a DXFile associated with an existing file in a particular project or container.
getInstance(String) - Static method in class com.dnanexus.DXGTable
Deprecated.
Returns a DXGTable associated with an existing GTable.
getInstance(String, DXContainer) - Static method in class com.dnanexus.DXGTable
Deprecated.
Returns a DXGTable associated with an existing GTable in a particular project or container.
getInstance(String) - Static method in class com.dnanexus.DXJob
Returns a DXJob representing the specified job.
getInstance(String) - Static method in class com.dnanexus.DXProject
Returns a DXProject associated with an existing project.
getInstance(String) - Static method in class com.dnanexus.DXRecord
Returns a DXRecord associated with an existing record.
getInstance(String, DXContainer) - Static method in class com.dnanexus.DXRecord
Returns a DXRecord associated with an existing record in a particular project or container.
getInstance(String) - Static method in class com.dnanexus.DXWorkflow
Returns a DXWorkflow associated with an existing workflow.
getInstance(String, DXContainer) - Static method in class com.dnanexus.DXWorkflow
Returns a DXWorkflow associated with an existing workflow in a particular project or container.
getInstance(String, String, int) - Static method in exception com.dnanexus.exceptions.DXAPIException
Constructs a DXAPIException of the appropriate subclass based on the errorType.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXAnalysis
Returns a DXAnalysis representing the specified analysis using the specified environment.
getInstanceWithEnvironment(String, DXContainer, DXEnvironment) - Static method in class com.dnanexus.DXApplet
Returns a DXApplet associated with an existing applet in a particular project using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXApplet
Returns a DXApplet associated with an existing applet using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXContainer
Returns a DXProject or DXContainer associated with an existing project or container, using the specified environment.
getInstanceWithEnvironment(String, DXContainer, DXEnvironment) - Static method in class com.dnanexus.DXDataObject
Returns a DXDataObject corresponding to an existing object with the specified ID in the specified project or container, using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXDataObject
Returns a DXDataObject corresponding to an existing object with the specified ID, using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXExecution
Returns a DXExecution corresponding to an existing execution with the specified ID, using the specified environment.
getInstanceWithEnvironment(String, DXContainer, DXEnvironment) - Static method in class com.dnanexus.DXFile
Returns a DXFile associated with an existing file in a particular project using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXFile
Returns a DXFile associated with an existing file using the specified environment.
getInstanceWithEnvironment(String, DXContainer, DXEnvironment) - Static method in class com.dnanexus.DXGTable
Deprecated.
Returns a DXGTable associated with an existing GTable in a particular project using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXGTable
Deprecated.
Returns a DXGTable associated with an existing GTable using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXJob
Returns a DXJob representing the specified job using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXProject
Returns a DXProject associated with an existing project using the specified environment.
getInstanceWithEnvironment(String, DXContainer, DXEnvironment) - Static method in class com.dnanexus.DXRecord
Returns a DXRecord associated with an existing record in a particular project using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXRecord
Returns a DXRecord associated with an existing record using the specified environment.
getInstanceWithEnvironment(String, DXContainer, DXEnvironment) - Static method in class com.dnanexus.DXWorkflow
Returns a DXWorkflow associated with an existing workflow in a particular project using the specified environment.
getInstanceWithEnvironment(String, DXEnvironment) - Static method in class com.dnanexus.DXWorkflow
Returns a DXWorkflow associated with an existing workflow using the specified environment.
getInterpreter() - Method in class com.dnanexus.RunSpecification
Returns the interpreter for the applet.
getIOClass() - Method in class com.dnanexus.InputParameter
Returns the class of the parameter.
getIOClass() - Method in class com.dnanexus.OutputParameter
Returns the class of the parameter.
getJob() - Method in class com.dnanexus.DXEnvironment
Returns a handler to the currently running job.
getJobInput(Class<T>) - Static method in class com.dnanexus.DXUtil
Obtains the job input and deserializes it to the specified class.
getLaunchedBy() - Method in class com.dnanexus.DXExecution.Describe
Returns the user that launched this execution.
getLinkAsJson() - Method in class com.dnanexus.DXDataObject
Returns a DNAnexus link for this object.
getMD5(int) - Method in class com.dnanexus.DXFile.Describe
Returns the hexadecimal encoded value of MD5 message-digest of the specified file part.
getMediaType() - Method in class com.dnanexus.DXFile.Describe
Returns the Internet Media Type of the file.
getModificationDate() - Method in class com.dnanexus.DXDataObject.Describe
Returns the last modification date of the object.
getModifiedDate() - Method in class com.dnanexus.DXExecution.Describe
Returns the date at which the execution was last modified.
getName() - Method in class com.dnanexus.ColumnSpecification
Returns the column name.
getName() - Method in class com.dnanexus.DXDataObject.Describe
Returns the name of the object.
getName() - Method in class com.dnanexus.DXExecution.Describe
Returns the name of the execution.
getName() - Method in class com.dnanexus.DXProject.Describe
Returns the name of the project.
getName() - Method in class com.dnanexus.InputParameter
Returns the name of the parameter.
getName() - Method in class com.dnanexus.OutputParameter
Returns the name of the parameter.
getNewObjectId(JsonNode) - Static method in class com.dnanexus.DXDataObject.Builder
Deserializes the response to a /class-xxxx/new API call and returns the ID of the newly created object.
getNewState() - Method in class com.dnanexus.DXJob.StateTransition
Returns the state of the job after the transition.
getNext() - Method in interface com.dnanexus.DXSearch.FindResultPage
Returns an object that can be used in a later call to getSubsequentPage (e.g.
getNumRows() - Method in class com.dnanexus.DXGTable.Describe
Deprecated.
Returns the number of rows in the table.
getObjectBuilder() - Static method in class com.dnanexus.DXJSON
Creates a new ObjectBuilder, initialized to produce an empty object.
getObjects() - Method in class com.dnanexus.DXContainer.FolderContents
Lists all data objects in the specified folder.
getOriginalInput(Class<T>) - Method in class com.dnanexus.DXExecution.Describe
Returns the input of the execution, with default values filled in for optional inputs that were not provided, deserialized to the specified class.
getOriginJob() - Method in class com.dnanexus.DXJob.Describe
Returns the closest ancestor job whose parentJob is null.
getOutput(Class<T>) - Method in class com.dnanexus.DXAnalysis.Describe
Returns the output of the analysis, deserialized to the specified class, or null if no output hash is available.
getOutput(Class<T>) - Method in class com.dnanexus.DXAnalysis
 
getOutput(Class<T>) - Method in class com.dnanexus.DXExecution.Describe
Returns the output of the execution, deserialized to the specified class, or null if no output hash is available.
getOutput(Class<T>) - Method in class com.dnanexus.DXExecution
Returns the output of the execution, deserialized to the specified class.
getOutput(Class<T>) - Method in class com.dnanexus.DXJob.Describe
Returns the output of the job, deserialized to the specified class, or null if no output hash is available.
getOutput(Class<T>) - Method in class com.dnanexus.DXJob
 
getOutputReference(String) - Method in class com.dnanexus.DXWorkflow.Stage
Create a link to an output field.
getOutputSpecification() - Method in class com.dnanexus.DXApplet.Describe
Returns the applet's output specification.
getParentAnalysis() - Method in class com.dnanexus.DXExecution.Describe
Returns the execution's parent analysis, or null if the execution was not created by a analysis.
getParentJob() - Method in class com.dnanexus.DXExecution.Describe
Returns the execution's parent job, or null if the execution was not created by a job.
getProject() - Method in class com.dnanexus.DXDataObject.Describe
Returns the project or container from which user-provided metadata was retrieved.
getProject() - Method in class com.dnanexus.DXDataObject
Returns the object's project or container, if it was explicitly supplied.
getProject() - Method in class com.dnanexus.DXExecution.Describe
Returns the project in which this execution was run.
getProjectCache() - Method in class com.dnanexus.DXJob.Describe
Returns the project cache container for the job if it is running an app, or null otherwise.
getProjectContext() - Method in class com.dnanexus.DXEnvironment
Returns the current project context.
getProperties() - Method in class com.dnanexus.DXDataObject.Describe
Returns the properties associated with the object.
getProperties() - Method in class com.dnanexus.DXExecution.Describe
Returns the properties associated with the execution.
getResources() - Method in class com.dnanexus.DXJob.Describe
Returns the resources container for the job if it is running an app, or null otherwise.
getRootExecution() - Method in class com.dnanexus.DXExecution.Describe
Returns the execution at the root of the execution tree (the job or analysis that was created by a user's external API call rather than by a job or run as a stage in an analysis).
getRunInput(Class<T>) - Method in class com.dnanexus.DXExecution.Describe
Returns the raw input of the execution, deserialized to the specified class.
getRunSpecification() - Method in class com.dnanexus.DXApplet.Describe
Returns the applet's run specification.
getSecondsToWaitForRetry() - Method in exception com.dnanexus.exceptions.ServiceUnavailableException
 
getSecurityContext() - Method in class com.dnanexus.DXEnvironment
Deprecated. 
getSetAt() - Method in class com.dnanexus.DXJob.StateTransition
Returns the date at which the new state became effective.
getSize() - Method in class com.dnanexus.DXFile.Describe
Returns the size of the file in bytes.
getStage() - Method in class com.dnanexus.DXExecution.Describe
Returns the stage that this execution is associated with, if it was run as a stage in an analysis; null otherwise.
getStartDate() - Method in class com.dnanexus.DXJob.Describe
Returns the date that the job started running, or null if the job has not started running yet.
getState() - Method in class com.dnanexus.DXAnalysis.Describe
Returns the state of the analysis.
getState() - Method in class com.dnanexus.DXDataObject.Describe
Returns the state of the object.
getState() - Method in class com.dnanexus.DXJob.Describe
Returns the state of the job.
getStateTransitions() - Method in class com.dnanexus.DXJob.Describe
Returns a list of the state transitions for the job, showing each state that the job reached and at what time.
getStatusCode() - Method in exception com.dnanexus.exceptions.DXAPIException
Returns the HTTP status code associated with the error.
getStopDate() - Method in class com.dnanexus.DXJob.Describe
Returns the date that the job stopped running, or null if the job has not stopped running yet.
getSubfolders() - Method in class com.dnanexus.DXContainer.FolderContents
Lists all subfolders of the specified folder.
getSubsequentPage(JsonNode, int) - Method in class com.dnanexus.DXSearch.FindDataObjectsResult
Returns a subsequent page of the findDataObjects results starting from the specified item.
getSummary() - Method in class com.dnanexus.DXApplet.Describe
Returns the applet summary.
getTags() - Method in class com.dnanexus.DXDataObject.Describe
Returns a list of tags associated with the object.
getTags() - Method in class com.dnanexus.DXExecution.Describe
Returns the tags associated with the execution.
getThisInstance() - Method in class com.dnanexus.DXApplet.Builder
 
getThisInstance() - Method in class com.dnanexus.DXDataObject.Builder
Returns the builder object.
getThisInstance() - Method in class com.dnanexus.DXFile.Builder
 
getThisInstance() - Method in class com.dnanexus.DXRecord.Builder
 
getThisInstance() - Method in class com.dnanexus.DXWorkflow.Builder
 
getTitle() - Method in class com.dnanexus.DXApplet.Describe
Returns the applet title.
getTotalPrice() - Method in class com.dnanexus.DXExecution.Describe
Returns the total price of the job.
getType() - Method in class com.dnanexus.ColumnSpecification
Returns the column type.
getTypes() - Method in class com.dnanexus.DXDataObject.Describe
Returns a list of types associated with the object.
getUploadStream() - Method in class com.dnanexus.DXFile
Returns an OutputStream that uploads any data written to it
getValue() - Method in class com.dnanexus.DXWorkflow.Modification
 
getWorkspace() - Method in class com.dnanexus.DXEnvironment
Returns the temporary workspace of the currently running job, or the current project if this method is called outside the Execution Environment.
getWorkspace() - Method in class com.dnanexus.DXExecution.Describe
Returns the temporary workspace associated with the execution.
gtableAddRows(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddRows method with an empty input, deserializing to an object of the specified class.
gtableAddRows(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddRows method with the given input, deserializing to an object of the specified class.
gtableAddRows(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddRows method with an empty input using the given environment, deserializing to an object of the specified class.
gtableAddRows(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddRows method with the given input using the given environment, deserializing to an object of the specified class.
gtableAddRows(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddRows(String, Class) instead and supply your own class to deserialize to.
gtableAddRows(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddRows(String, Object, Class) instead and supply your own class to deserialize to.
gtableAddRows(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddRows(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableAddRows(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddRows(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddTags method with an empty input, deserializing to an object of the specified class.
gtableAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddTags method with the given input, deserializing to an object of the specified class.
gtableAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
gtableAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddTags method with the given input using the given environment, deserializing to an object of the specified class.
gtableAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddTags(String, Class) instead and supply your own class to deserialize to.
gtableAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddTags(String, Object, Class) instead and supply your own class to deserialize to.
gtableAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableAddTypes(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddTypes method with an empty input, deserializing to an object of the specified class.
gtableAddTypes(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddTypes method with the given input, deserializing to an object of the specified class.
gtableAddTypes(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddTypes method with an empty input using the given environment, deserializing to an object of the specified class.
gtableAddTypes(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableAddTypes method with the given input using the given environment, deserializing to an object of the specified class.
gtableAddTypes(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddTypes(String, Class) instead and supply your own class to deserialize to.
gtableAddTypes(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddTypes(String, Object, Class) instead and supply your own class to deserialize to.
gtableAddTypes(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddTypes(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableAddTypes(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableAddTypes(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableClose(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableClose method with an empty input, deserializing to an object of the specified class.
gtableClose(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableClose method with the given input, deserializing to an object of the specified class.
gtableClose(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableClose method with an empty input using the given environment, deserializing to an object of the specified class.
gtableClose(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableClose method with the given input using the given environment, deserializing to an object of the specified class.
gtableClose(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableClose(String, Class) instead and supply your own class to deserialize to.
gtableClose(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableClose(String, Object, Class) instead and supply your own class to deserialize to.
gtableClose(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableClose(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableClose(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableClose(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableDescribe method with an empty input, deserializing to an object of the specified class.
gtableDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableDescribe method with the given input, deserializing to an object of the specified class.
gtableDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
gtableDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableDescribe method with the given input using the given environment, deserializing to an object of the specified class.
gtableDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableDescribe(String, Class) instead and supply your own class to deserialize to.
gtableDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableDescribe(String, Object, Class) instead and supply your own class to deserialize to.
gtableDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableGet(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableGet method with an empty input, deserializing to an object of the specified class.
gtableGet(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableGet method with the given input, deserializing to an object of the specified class.
gtableGet(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableGet method with an empty input using the given environment, deserializing to an object of the specified class.
gtableGet(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableGet method with the given input using the given environment, deserializing to an object of the specified class.
gtableGet(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableGet(String, Class) instead and supply your own class to deserialize to.
gtableGet(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableGet(String, Object, Class) instead and supply your own class to deserialize to.
gtableGet(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableGet(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableGet(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableGet(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableGetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableGetDetails method with an empty input, deserializing to an object of the specified class.
gtableGetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableGetDetails method with the given input, deserializing to an object of the specified class.
gtableGetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableGetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
gtableGetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableGetDetails method with the given input using the given environment, deserializing to an object of the specified class.
gtableGetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableGetDetails(String, Class) instead and supply your own class to deserialize to.
gtableGetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableGetDetails(String, Object, Class) instead and supply your own class to deserialize to.
gtableGetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableGetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableGetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableGetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableListProjects(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableListProjects method with an empty input, deserializing to an object of the specified class.
gtableListProjects(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableListProjects method with the given input, deserializing to an object of the specified class.
gtableListProjects(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableListProjects method with an empty input using the given environment, deserializing to an object of the specified class.
gtableListProjects(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableListProjects method with the given input using the given environment, deserializing to an object of the specified class.
gtableListProjects(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableListProjects(String, Class) instead and supply your own class to deserialize to.
gtableListProjects(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableListProjects(String, Object, Class) instead and supply your own class to deserialize to.
gtableListProjects(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableListProjects(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableListProjects(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableListProjects(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableNew method with an empty input, deserializing to an object of the specified class.
gtableNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableNew method with an empty input using the specified environment, deserializing to an object of the specified class.
gtableNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableNew method with the specified input, deserializing to an object of the specified class.
gtableNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableNew method with the specified input using the specified environment, deserializing to an object of the specified class.
gtableNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableNew(Class) instead and supply your own class to deserialize to.
gtableNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableNew(Object, Class) instead and supply your own class to deserialize to.
gtableNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableNextPart(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableNextPart method with an empty input, deserializing to an object of the specified class.
gtableNextPart(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableNextPart method with the given input, deserializing to an object of the specified class.
gtableNextPart(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableNextPart method with an empty input using the given environment, deserializing to an object of the specified class.
gtableNextPart(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableNextPart method with the given input using the given environment, deserializing to an object of the specified class.
gtableNextPart(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableNextPart(String, Class) instead and supply your own class to deserialize to.
gtableNextPart(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableNextPart(String, Object, Class) instead and supply your own class to deserialize to.
gtableNextPart(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableNextPart(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableNextPart(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableNextPart(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRemoveTags method with an empty input, deserializing to an object of the specified class.
gtableRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRemoveTags method with the given input, deserializing to an object of the specified class.
gtableRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
gtableRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
gtableRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRemoveTags(String, Class) instead and supply your own class to deserialize to.
gtableRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
gtableRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableRemoveTypes(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRemoveTypes method with an empty input, deserializing to an object of the specified class.
gtableRemoveTypes(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRemoveTypes method with the given input, deserializing to an object of the specified class.
gtableRemoveTypes(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRemoveTypes method with an empty input using the given environment, deserializing to an object of the specified class.
gtableRemoveTypes(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRemoveTypes method with the given input using the given environment, deserializing to an object of the specified class.
gtableRemoveTypes(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRemoveTypes(String, Class) instead and supply your own class to deserialize to.
gtableRemoveTypes(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRemoveTypes(String, Object, Class) instead and supply your own class to deserialize to.
gtableRemoveTypes(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRemoveTypes(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableRemoveTypes(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRemoveTypes(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableRename(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRename method with an empty input, deserializing to an object of the specified class.
gtableRename(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRename method with the given input, deserializing to an object of the specified class.
gtableRename(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRename method with an empty input using the given environment, deserializing to an object of the specified class.
gtableRename(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableRename method with the given input using the given environment, deserializing to an object of the specified class.
gtableRename(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRename(String, Class) instead and supply your own class to deserialize to.
gtableRename(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRename(String, Object, Class) instead and supply your own class to deserialize to.
gtableRename(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRename(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableRename(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableRename(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableSetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetDetails method with an empty input, deserializing to an object of the specified class.
gtableSetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetDetails method with the given input, deserializing to an object of the specified class.
gtableSetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
gtableSetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetDetails method with the given input using the given environment, deserializing to an object of the specified class.
gtableSetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetDetails(String, Class) instead and supply your own class to deserialize to.
gtableSetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetDetails(String, Object, Class) instead and supply your own class to deserialize to.
gtableSetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableSetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableSetProperties(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetProperties method with an empty input, deserializing to an object of the specified class.
gtableSetProperties(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetProperties method with the given input, deserializing to an object of the specified class.
gtableSetProperties(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetProperties method with an empty input using the given environment, deserializing to an object of the specified class.
gtableSetProperties(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetProperties method with the given input using the given environment, deserializing to an object of the specified class.
gtableSetProperties(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetProperties(String, Class) instead and supply your own class to deserialize to.
gtableSetProperties(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetProperties(String, Object, Class) instead and supply your own class to deserialize to.
gtableSetProperties(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetProperties(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableSetProperties(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetProperties(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableSetVisibility(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetVisibility method with an empty input, deserializing to an object of the specified class.
gtableSetVisibility(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetVisibility method with the given input, deserializing to an object of the specified class.
gtableSetVisibility(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetVisibility method with an empty input using the given environment, deserializing to an object of the specified class.
gtableSetVisibility(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the gtableSetVisibility method with the given input using the given environment, deserializing to an object of the specified class.
gtableSetVisibility(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetVisibility(String, Class) instead and supply your own class to deserialize to.
gtableSetVisibility(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetVisibility(String, Object, Class) instead and supply your own class to deserialize to.
gtableSetVisibility(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetVisibility(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
gtableSetVisibility(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.gtableSetVisibility(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.

H

hashCode() - Method in class com.dnanexus.ColumnSpecification
 
hashCode() - Method in class com.dnanexus.DXDataObject
 
hashCode() - Method in class com.dnanexus.DXJob.StateTransition
 
hashCode() - Method in class com.dnanexus.DXObject
 
hasNextPage() - Method in interface com.dnanexus.DXSearch.FindResultPage
Returns true if more results exist.
hidden - Variable in class com.dnanexus.DXDataObject.Builder
 

I

id - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
includeDescribeOutput() - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Requests the default describe data for each matching data object when the query is run.
includeDescribeOutput(DXDataObject.DescribeOptions) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Requests describe data (with the specified options) for each matching data object when the query is run.
includeDescribeOutput() - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Requests the default describe data for each matching execution when the query is run.
includeSubjobs(boolean) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Specifies whether subjobs should be included among the results (default is true).
inFolder(DXContainer, String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns objects in the specified folder of the specified project (not in subfolders).
inFolder(String) - Method in class com.dnanexus.ExecutableRunner
Deprecated.
inFolderOrSubfolders(DXContainer, String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns objects in the specified folder of the specified project or in its subfolders.
inProject(DXContainer) - Method in class com.dnanexus.DXDataObject.DescribeOptions
Returns a DescribeOptions that behaves like the current one, except that project-specific metadata will be retrieved from the specified project or container.
inProject(DXContainer) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns objects in the specified project.
inProject(DXContainer) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions in the specified project.
inProject(DXProject) - Method in class com.dnanexus.ExecutableRunner
input - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
InputParameter - Class in com.dnanexus
An input parameter for an executable.
InputParameter.Builder - Class in com.dnanexus
Builder class for creating new input parameters.
InternalErrorException - Exception in com.dnanexus.exceptions
Exception which indicates a 500 status code Internal Server Error.
InternalErrorException(String, int) - Constructor for exception com.dnanexus.exceptions.InternalErrorException
Creates an InternalErrorException with the specified message and HTTP status code.
InvalidAuthenticationException - Exception in com.dnanexus.exceptions
The OAuth2 token supplied with the request was invalid.
InvalidAuthenticationException(String, int) - Constructor for exception com.dnanexus.exceptions.InvalidAuthenticationException
Creates an InvalidAuthenticationException with the specified message and HTTP status code.
InvalidInputException - Exception in com.dnanexus.exceptions
The input is syntactically correct but semantically incorrect.
InvalidInputException(String, int) - Constructor for exception com.dnanexus.exceptions.InvalidInputException
Creates an InvalidInputException with the specified message and HTTP status code.
InvalidStateException - Exception in com.dnanexus.exceptions
The operation is not allowed at this object state.
InvalidStateException(String, int) - Constructor for exception com.dnanexus.exceptions.InvalidStateException
Creates an InvalidStateException with the specified message and HTTP status code.
InvalidTypeException - Exception in com.dnanexus.exceptions
An object specified in the request is of invalid type.
InvalidTypeException(String, int) - Constructor for exception com.dnanexus.exceptions.InvalidTypeException
Creates an InvalidTypeException with the specified message and HTTP status code.
IOClass - Enum in com.dnanexus
The type of an input or output field of an executable.
isFree() - Method in class com.dnanexus.DXJob.Describe
Returns whether the job will be charged to the billed entity (billTo).
isOptional() - Method in class com.dnanexus.InputParameter
Returns whether the parameter is optional.
isOptional() - Method in class com.dnanexus.OutputParameter
Returns whether the parameter is optional.
isRetryDisabled() - Method in class com.dnanexus.DXEnvironment
Returns whether the retry of HTTP requests should be disabled.
isVisible() - Method in class com.dnanexus.DXDataObject.Describe
Returns whether the object is visible.
isWorkspaceDestructionDelayed() - Method in class com.dnanexus.DXExecution.Describe
Returns true if the execution's temporary workspace will be kept around for 3 days after the execution finishes.
iterator() - Method in class com.dnanexus.DXSearch.FindDataObjectsResult
 
iterator() - Method in class com.dnanexus.DXSearch.FindExecutionsResult
 

J

jobAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobAddTags method with an empty input, deserializing to an object of the specified class.
jobAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobAddTags method with the given input, deserializing to an object of the specified class.
jobAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
jobAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobAddTags method with the given input using the given environment, deserializing to an object of the specified class.
jobAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobAddTags(String, Class) instead and supply your own class to deserialize to.
jobAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobAddTags(String, Object, Class) instead and supply your own class to deserialize to.
jobAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobDescribe method with an empty input, deserializing to an object of the specified class.
jobDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobDescribe method with the given input, deserializing to an object of the specified class.
jobDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
jobDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobDescribe method with the given input using the given environment, deserializing to an object of the specified class.
jobDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobDescribe(String, Class) instead and supply your own class to deserialize to.
jobDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobDescribe(String, Object, Class) instead and supply your own class to deserialize to.
jobDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobGetLog(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobGetLog method with an empty input, deserializing to an object of the specified class.
jobGetLog(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobGetLog method with the given input, deserializing to an object of the specified class.
jobGetLog(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobGetLog method with an empty input using the given environment, deserializing to an object of the specified class.
jobGetLog(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobGetLog method with the given input using the given environment, deserializing to an object of the specified class.
jobGetLog(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobGetLog(String, Class) instead and supply your own class to deserialize to.
jobGetLog(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobGetLog(String, Object, Class) instead and supply your own class to deserialize to.
jobGetLog(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobGetLog(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobGetLog(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobGetLog(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobNew method with an empty input, deserializing to an object of the specified class.
jobNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobNew method with an empty input using the specified environment, deserializing to an object of the specified class.
jobNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobNew method with the specified input, deserializing to an object of the specified class.
jobNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobNew method with the specified input using the specified environment, deserializing to an object of the specified class.
jobNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobNew(Class) instead and supply your own class to deserialize to.
jobNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobNew(Object, Class) instead and supply your own class to deserialize to.
jobNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
jobNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobRemoveTags method with an empty input, deserializing to an object of the specified class.
jobRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobRemoveTags method with the given input, deserializing to an object of the specified class.
jobRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
jobRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
jobRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobRemoveTags(String, Class) instead and supply your own class to deserialize to.
jobRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
jobRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobSetProperties(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobSetProperties method with an empty input, deserializing to an object of the specified class.
jobSetProperties(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobSetProperties method with the given input, deserializing to an object of the specified class.
jobSetProperties(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobSetProperties method with an empty input using the given environment, deserializing to an object of the specified class.
jobSetProperties(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobSetProperties method with the given input using the given environment, deserializing to an object of the specified class.
jobSetProperties(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobSetProperties(String, Class) instead and supply your own class to deserialize to.
jobSetProperties(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobSetProperties(String, Object, Class) instead and supply your own class to deserialize to.
jobSetProperties(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobSetProperties(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobSetProperties(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobSetProperties(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
JobState - Enum in com.dnanexus
The state of a job in the system.
jobTerminate(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobTerminate method with an empty input, deserializing to an object of the specified class.
jobTerminate(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the jobTerminate method with the given input, deserializing to an object of the specified class.
jobTerminate(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobTerminate method with an empty input using the given environment, deserializing to an object of the specified class.
jobTerminate(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the jobTerminate method with the given input using the given environment, deserializing to an object of the specified class.
jobTerminate(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobTerminate(String, Class) instead and supply your own class to deserialize to.
jobTerminate(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobTerminate(String, Object, Class) instead and supply your own class to deserialize to.
jobTerminate(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobTerminate(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
jobTerminate(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.jobTerminate(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.

L

launchedBy - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
launchedBy(String) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions launched by the specified user.
listFolder(String) - Method in class com.dnanexus.DXContainer
Lists the data objects and subfolders inside the specified folder.
listProjects() - Method in class com.dnanexus.DXDataObject
Returns the set of projects that contain this object, and which the requesting user has permissions to access.

M

MAPPER - Static variable in class com.dnanexus.DXObject
 
MAPPER - Static variable in class com.dnanexus.ExecutableRunner
 
modified - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
modifiedAfter(Date) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects that were last modified after the specified time.
modifiedBefore(Date) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects that were last modified before the specified time.
move(List<? extends DXDataObject>, List<String>, String) - Method in class com.dnanexus.DXContainer
Moves the specified data objects and folders to a destination folder in the same container.
moveFolders(List<String>, String) - Method in class com.dnanexus.DXContainer
Moves the specified folders to a destination folder in the same container.
moveObjects(List<? extends DXDataObject>, String) - Method in class com.dnanexus.DXContainer
Moves the specified data objects to a destination folder in the same container.

N

name - Variable in class com.dnanexus.DXDataObject.Builder
 
name - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
nameMatchesExactly(String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns objects whose names exactly equal the specified string.
nameMatchesExactly(String) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions whose names exactly equal the specified string.
nameMatchesGlob(String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns objects whose name match the specified glob.
nameMatchesGlob(String) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions whose names match the specified glob.
nameMatchesRegexp(String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns objects whose names match the specified regexp.
nameMatchesRegexp(String, boolean) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns objects whose names match the specified regexp (optionally allowing the match to be case insensitive).
nameMatchesRegexp(String) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions whose names match the specified regexp.
nameMatchesRegexp(String, boolean) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions whose names match the specified regexp (optionally allowing the match to be case insensitive).
newApplet() - Static method in class com.dnanexus.DXApplet
Returns a Builder object for creating a new DXApplet.
newAppletWithEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXApplet
Returns a Builder object for creating a new DXApplet using the specified environment.
newFile() - Static method in class com.dnanexus.DXFile
Returns a Builder object for creating a new DXFile.
newFileWithEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXFile
Returns a Builder object for creating a new DXFile using the specified environment.
newFolder(String) - Method in class com.dnanexus.DXContainer
Creates the specified folder.
newFolder(String, boolean) - Method in class com.dnanexus.DXContainer
Creates the specified folder, optionally creating parent folders as well.
newInputParameter(String, IOClass) - Static method in class com.dnanexus.InputParameter
Returns a new input parameter builder initialized with the specified input name and class.
newOutputParameter(String, IOClass) - Static method in class com.dnanexus.OutputParameter
Returns a new output parameter builder initialized with the specified output name and class.
newProject() - Static method in class com.dnanexus.DXProject
Returns a Builder object for creating a new DXProject.
newProjectWithEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXProject
Returns a Builder object for creating a new DXProject using the specified environment.
newRecord() - Static method in class com.dnanexus.DXRecord
Returns a Builder object for creating a new DXRecord.
newRecordWithEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXRecord
Returns a Builder object for creating a new DXRecord using the specified environment.
newRun() - Method in class com.dnanexus.DXApplet
 
newRun() - Method in interface com.dnanexus.DXExecutable
Returns an object for creating a new run of this executable.
newRun() - Method in class com.dnanexus.DXWorkflow
 
newRunSpec(String, String) - Static method in class com.dnanexus.RunSpecification
Returns a builder initialized to create a run specification with the given interpreter and entry point code.
newWorkflow() - Static method in class com.dnanexus.DXWorkflow
Returns a Builder object for creating a new DXWorkflow.
newWorkflowWithEnvironment(DXEnvironment) - Static method in class com.dnanexus.DXWorkflow
Returns a Builder object for creating a new DXWorkflow using the specified environment.
notificationsGet(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the notificationsGet method with an empty input, deserializing to an object of the specified class.
notificationsGet(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the notificationsGet method with an empty input using the specified environment, deserializing to an object of the specified class.
notificationsGet(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the notificationsGet method with the specified input, deserializing to an object of the specified class.
notificationsGet(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the notificationsGet method with the specified input using the specified environment, deserializing to an object of the specified class.
notificationsGet() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.notificationsGet(Class) instead and supply your own class to deserialize to.
notificationsGet(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.notificationsGet(Object, Class) instead and supply your own class to deserialize to.
notificationsGet(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.notificationsGet(Class, DXEnvironment) instead and supply your own class to deserialize to.
notificationsGet(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.notificationsGet(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
notificationsMarkRead(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the notificationsMarkRead method with an empty input, deserializing to an object of the specified class.
notificationsMarkRead(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the notificationsMarkRead method with an empty input using the specified environment, deserializing to an object of the specified class.
notificationsMarkRead(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the notificationsMarkRead method with the specified input, deserializing to an object of the specified class.
notificationsMarkRead(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the notificationsMarkRead method with the specified input using the specified environment, deserializing to an object of the specified class.
notificationsMarkRead() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.notificationsMarkRead(Class) instead and supply your own class to deserialize to.
notificationsMarkRead(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.notificationsMarkRead(Object, Class) instead and supply your own class to deserialize to.
notificationsMarkRead(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.notificationsMarkRead(Class, DXEnvironment) instead and supply your own class to deserialize to.
notificationsMarkRead(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.notificationsMarkRead(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.

O

of(String) - Static method in class com.dnanexus.DXSearch.TagsQuery
A query that matches the specified tag.
of(String) - Static method in class com.dnanexus.DXSearch.TypeQuery
A query that matches the specified type.
optional() - Method in class com.dnanexus.InputParameter.Builder
Makes this input parameter optional.
optional() - Method in class com.dnanexus.OutputParameter.Builder
Makes this output parameter optional.
orgDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgDescribe method with an empty input, deserializing to an object of the specified class.
orgDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgDescribe method with the given input, deserializing to an object of the specified class.
orgDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
orgDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgDescribe method with the given input using the given environment, deserializing to an object of the specified class.
orgDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgDescribe(String, Class) instead and supply your own class to deserialize to.
orgDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgDescribe(String, Object, Class) instead and supply your own class to deserialize to.
orgDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgFindApps(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindApps method with an empty input, deserializing to an object of the specified class.
orgFindApps(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindApps method with the given input, deserializing to an object of the specified class.
orgFindApps(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindApps method with an empty input using the given environment, deserializing to an object of the specified class.
orgFindApps(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindApps method with the given input using the given environment, deserializing to an object of the specified class.
orgFindApps(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindApps(String, Class) instead and supply your own class to deserialize to.
orgFindApps(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindApps(String, Object, Class) instead and supply your own class to deserialize to.
orgFindApps(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindApps(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgFindApps(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindApps(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgFindMembers(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindMembers method with an empty input, deserializing to an object of the specified class.
orgFindMembers(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindMembers method with the given input, deserializing to an object of the specified class.
orgFindMembers(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindMembers method with an empty input using the given environment, deserializing to an object of the specified class.
orgFindMembers(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindMembers method with the given input using the given environment, deserializing to an object of the specified class.
orgFindMembers(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindMembers(String, Class) instead and supply your own class to deserialize to.
orgFindMembers(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindMembers(String, Object, Class) instead and supply your own class to deserialize to.
orgFindMembers(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindMembers(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgFindMembers(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindMembers(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgFindProjects(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindProjects method with an empty input, deserializing to an object of the specified class.
orgFindProjects(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindProjects method with the given input, deserializing to an object of the specified class.
orgFindProjects(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindProjects method with an empty input using the given environment, deserializing to an object of the specified class.
orgFindProjects(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgFindProjects method with the given input using the given environment, deserializing to an object of the specified class.
orgFindProjects(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindProjects(String, Class) instead and supply your own class to deserialize to.
orgFindProjects(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindProjects(String, Object, Class) instead and supply your own class to deserialize to.
orgFindProjects(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindProjects(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgFindProjects(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgFindProjects(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgInvite(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgInvite method with an empty input, deserializing to an object of the specified class.
orgInvite(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgInvite method with the given input, deserializing to an object of the specified class.
orgInvite(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgInvite method with an empty input using the given environment, deserializing to an object of the specified class.
orgInvite(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgInvite method with the given input using the given environment, deserializing to an object of the specified class.
orgInvite(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgInvite(String, Class) instead and supply your own class to deserialize to.
orgInvite(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgInvite(String, Object, Class) instead and supply your own class to deserialize to.
orgInvite(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgInvite(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgInvite(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgInvite(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgNew method with an empty input, deserializing to an object of the specified class.
orgNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgNew method with an empty input using the specified environment, deserializing to an object of the specified class.
orgNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgNew method with the specified input, deserializing to an object of the specified class.
orgNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgNew method with the specified input using the specified environment, deserializing to an object of the specified class.
orgNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgNew(Class) instead and supply your own class to deserialize to.
orgNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgNew(Object, Class) instead and supply your own class to deserialize to.
orgNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
orgNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgRemoveMember(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgRemoveMember method with an empty input, deserializing to an object of the specified class.
orgRemoveMember(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgRemoveMember method with the given input, deserializing to an object of the specified class.
orgRemoveMember(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgRemoveMember method with an empty input using the given environment, deserializing to an object of the specified class.
orgRemoveMember(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgRemoveMember method with the given input using the given environment, deserializing to an object of the specified class.
orgRemoveMember(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgRemoveMember(String, Class) instead and supply your own class to deserialize to.
orgRemoveMember(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgRemoveMember(String, Object, Class) instead and supply your own class to deserialize to.
orgRemoveMember(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgRemoveMember(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgRemoveMember(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgRemoveMember(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgSetMemberAccess(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgSetMemberAccess method with an empty input, deserializing to an object of the specified class.
orgSetMemberAccess(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgSetMemberAccess method with the given input, deserializing to an object of the specified class.
orgSetMemberAccess(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgSetMemberAccess method with an empty input using the given environment, deserializing to an object of the specified class.
orgSetMemberAccess(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgSetMemberAccess method with the given input using the given environment, deserializing to an object of the specified class.
orgSetMemberAccess(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgSetMemberAccess(String, Class) instead and supply your own class to deserialize to.
orgSetMemberAccess(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgSetMemberAccess(String, Object, Class) instead and supply your own class to deserialize to.
orgSetMemberAccess(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgSetMemberAccess(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgSetMemberAccess(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgSetMemberAccess(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgUpdate(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgUpdate method with an empty input, deserializing to an object of the specified class.
orgUpdate(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the orgUpdate method with the given input, deserializing to an object of the specified class.
orgUpdate(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgUpdate method with an empty input using the given environment, deserializing to an object of the specified class.
orgUpdate(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the orgUpdate method with the given input using the given environment, deserializing to an object of the specified class.
orgUpdate(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgUpdate(String, Class) instead and supply your own class to deserialize to.
orgUpdate(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgUpdate(String, Object, Class) instead and supply your own class to deserialize to.
orgUpdate(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgUpdate(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
orgUpdate(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.orgUpdate(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
originalInput - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
output - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
OutputParameter - Class in com.dnanexus
An output parameter for an executable.
OutputParameter.Builder - Class in com.dnanexus
Builder class for creating new output parameters.

P

parentAnalysis - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
parentJob - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
parseJson(String) - Static method in class com.dnanexus.DXJSON
Parses the specified string into a JSON object.
PermissionDeniedException - Exception in com.dnanexus.exceptions
The client has insufficient permissions to perform this action.
PermissionDeniedException(String, int) - Constructor for exception com.dnanexus.exceptions.PermissionDeniedException
Creates a PermissionDeniedException with the specified message and HTTP status code.
project - Variable in class com.dnanexus.DXDataObject.Builder
 
project - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
projectAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectAddTags method with an empty input, deserializing to an object of the specified class.
projectAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectAddTags method with the given input, deserializing to an object of the specified class.
projectAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
projectAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectAddTags method with the given input using the given environment, deserializing to an object of the specified class.
projectAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectAddTags(String, Class) instead and supply your own class to deserialize to.
projectAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectAddTags(String, Object, Class) instead and supply your own class to deserialize to.
projectAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectClone(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectClone method with an empty input, deserializing to an object of the specified class.
projectClone(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectClone method with the given input, deserializing to an object of the specified class.
projectClone(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectClone method with an empty input using the given environment, deserializing to an object of the specified class.
projectClone(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectClone method with the given input using the given environment, deserializing to an object of the specified class.
projectClone(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectClone(String, Class) instead and supply your own class to deserialize to.
projectClone(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectClone(String, Object, Class) instead and supply your own class to deserialize to.
projectClone(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectClone(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectClone(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectClone(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectDecreasePermissions(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectDecreasePermissions method with an empty input, deserializing to an object of the specified class.
projectDecreasePermissions(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectDecreasePermissions method with the given input, deserializing to an object of the specified class.
projectDecreasePermissions(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectDecreasePermissions method with an empty input using the given environment, deserializing to an object of the specified class.
projectDecreasePermissions(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectDecreasePermissions method with the given input using the given environment, deserializing to an object of the specified class.
projectDecreasePermissions(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDecreasePermissions(String, Class) instead and supply your own class to deserialize to.
projectDecreasePermissions(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDecreasePermissions(String, Object, Class) instead and supply your own class to deserialize to.
projectDecreasePermissions(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDecreasePermissions(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectDecreasePermissions(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDecreasePermissions(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectDescribe method with an empty input, deserializing to an object of the specified class.
projectDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectDescribe method with the given input, deserializing to an object of the specified class.
projectDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
projectDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectDescribe method with the given input using the given environment, deserializing to an object of the specified class.
projectDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDescribe(String, Class) instead and supply your own class to deserialize to.
projectDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDescribe(String, Object, Class) instead and supply your own class to deserialize to.
projectDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectDestroy(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectDestroy method with an empty input, deserializing to an object of the specified class.
projectDestroy(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectDestroy method with the given input, deserializing to an object of the specified class.
projectDestroy(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectDestroy method with an empty input using the given environment, deserializing to an object of the specified class.
projectDestroy(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectDestroy method with the given input using the given environment, deserializing to an object of the specified class.
projectDestroy(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDestroy(String, Class) instead and supply your own class to deserialize to.
projectDestroy(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDestroy(String, Object, Class) instead and supply your own class to deserialize to.
projectDestroy(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDestroy(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectDestroy(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectDestroy(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectInvite(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectInvite method with an empty input, deserializing to an object of the specified class.
projectInvite(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectInvite method with the given input, deserializing to an object of the specified class.
projectInvite(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectInvite method with an empty input using the given environment, deserializing to an object of the specified class.
projectInvite(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectInvite method with the given input using the given environment, deserializing to an object of the specified class.
projectInvite(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectInvite(String, Class) instead and supply your own class to deserialize to.
projectInvite(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectInvite(String, Object, Class) instead and supply your own class to deserialize to.
projectInvite(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectInvite(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectInvite(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectInvite(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectLeave(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectLeave method with an empty input, deserializing to an object of the specified class.
projectLeave(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectLeave method with the given input, deserializing to an object of the specified class.
projectLeave(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectLeave method with an empty input using the given environment, deserializing to an object of the specified class.
projectLeave(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectLeave method with the given input using the given environment, deserializing to an object of the specified class.
projectLeave(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectLeave(String, Class) instead and supply your own class to deserialize to.
projectLeave(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectLeave(String, Object, Class) instead and supply your own class to deserialize to.
projectLeave(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectLeave(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectLeave(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectLeave(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectListFolder(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectListFolder method with an empty input, deserializing to an object of the specified class.
projectListFolder(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectListFolder method with the given input, deserializing to an object of the specified class.
projectListFolder(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectListFolder method with an empty input using the given environment, deserializing to an object of the specified class.
projectListFolder(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectListFolder method with the given input using the given environment, deserializing to an object of the specified class.
projectListFolder(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectListFolder(String, Class) instead and supply your own class to deserialize to.
projectListFolder(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectListFolder(String, Object, Class) instead and supply your own class to deserialize to.
projectListFolder(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectListFolder(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectListFolder(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectListFolder(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectMove(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectMove method with an empty input, deserializing to an object of the specified class.
projectMove(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectMove method with the given input, deserializing to an object of the specified class.
projectMove(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectMove method with an empty input using the given environment, deserializing to an object of the specified class.
projectMove(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectMove method with the given input using the given environment, deserializing to an object of the specified class.
projectMove(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectMove(String, Class) instead and supply your own class to deserialize to.
projectMove(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectMove(String, Object, Class) instead and supply your own class to deserialize to.
projectMove(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectMove(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectMove(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectMove(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectNew method with an empty input, deserializing to an object of the specified class.
projectNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectNew method with an empty input using the specified environment, deserializing to an object of the specified class.
projectNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectNew method with the specified input, deserializing to an object of the specified class.
projectNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectNew method with the specified input using the specified environment, deserializing to an object of the specified class.
projectNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectNew(Class) instead and supply your own class to deserialize to.
projectNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectNew(Object, Class) instead and supply your own class to deserialize to.
projectNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
projectNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectNewFolder(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectNewFolder method with an empty input, deserializing to an object of the specified class.
projectNewFolder(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectNewFolder method with the given input, deserializing to an object of the specified class.
projectNewFolder(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectNewFolder method with an empty input using the given environment, deserializing to an object of the specified class.
projectNewFolder(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectNewFolder method with the given input using the given environment, deserializing to an object of the specified class.
projectNewFolder(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectNewFolder(String, Class) instead and supply your own class to deserialize to.
projectNewFolder(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectNewFolder(String, Object, Class) instead and supply your own class to deserialize to.
projectNewFolder(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectNewFolder(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectNewFolder(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectNewFolder(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectRemoveFolder(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveFolder method with an empty input, deserializing to an object of the specified class.
projectRemoveFolder(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveFolder method with the given input, deserializing to an object of the specified class.
projectRemoveFolder(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveFolder method with an empty input using the given environment, deserializing to an object of the specified class.
projectRemoveFolder(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveFolder method with the given input using the given environment, deserializing to an object of the specified class.
projectRemoveFolder(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveFolder(String, Class) instead and supply your own class to deserialize to.
projectRemoveFolder(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveFolder(String, Object, Class) instead and supply your own class to deserialize to.
projectRemoveFolder(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveFolder(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectRemoveFolder(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveFolder(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectRemoveObjects(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveObjects method with an empty input, deserializing to an object of the specified class.
projectRemoveObjects(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveObjects method with the given input, deserializing to an object of the specified class.
projectRemoveObjects(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveObjects method with an empty input using the given environment, deserializing to an object of the specified class.
projectRemoveObjects(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveObjects method with the given input using the given environment, deserializing to an object of the specified class.
projectRemoveObjects(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveObjects(String, Class) instead and supply your own class to deserialize to.
projectRemoveObjects(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveObjects(String, Object, Class) instead and supply your own class to deserialize to.
projectRemoveObjects(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveObjects(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectRemoveObjects(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveObjects(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveTags method with an empty input, deserializing to an object of the specified class.
projectRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveTags method with the given input, deserializing to an object of the specified class.
projectRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
projectRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
projectRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveTags(String, Class) instead and supply your own class to deserialize to.
projectRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
projectRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectRenameFolder(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectRenameFolder method with an empty input, deserializing to an object of the specified class.
projectRenameFolder(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectRenameFolder method with the given input, deserializing to an object of the specified class.
projectRenameFolder(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectRenameFolder method with an empty input using the given environment, deserializing to an object of the specified class.
projectRenameFolder(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectRenameFolder method with the given input using the given environment, deserializing to an object of the specified class.
projectRenameFolder(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRenameFolder(String, Class) instead and supply your own class to deserialize to.
projectRenameFolder(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRenameFolder(String, Object, Class) instead and supply your own class to deserialize to.
projectRenameFolder(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRenameFolder(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectRenameFolder(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectRenameFolder(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectSetProperties(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectSetProperties method with an empty input, deserializing to an object of the specified class.
projectSetProperties(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectSetProperties method with the given input, deserializing to an object of the specified class.
projectSetProperties(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectSetProperties method with an empty input using the given environment, deserializing to an object of the specified class.
projectSetProperties(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectSetProperties method with the given input using the given environment, deserializing to an object of the specified class.
projectSetProperties(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectSetProperties(String, Class) instead and supply your own class to deserialize to.
projectSetProperties(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectSetProperties(String, Object, Class) instead and supply your own class to deserialize to.
projectSetProperties(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectSetProperties(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectSetProperties(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectSetProperties(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectTransfer(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectTransfer method with an empty input, deserializing to an object of the specified class.
projectTransfer(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectTransfer method with the given input, deserializing to an object of the specified class.
projectTransfer(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectTransfer method with an empty input using the given environment, deserializing to an object of the specified class.
projectTransfer(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectTransfer method with the given input using the given environment, deserializing to an object of the specified class.
projectTransfer(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectTransfer(String, Class) instead and supply your own class to deserialize to.
projectTransfer(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectTransfer(String, Object, Class) instead and supply your own class to deserialize to.
projectTransfer(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectTransfer(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectTransfer(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectTransfer(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectUpdate(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectUpdate method with an empty input, deserializing to an object of the specified class.
projectUpdate(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectUpdate method with the given input, deserializing to an object of the specified class.
projectUpdate(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectUpdate method with an empty input using the given environment, deserializing to an object of the specified class.
projectUpdate(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectUpdate method with the given input using the given environment, deserializing to an object of the specified class.
projectUpdate(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectUpdate(String, Class) instead and supply your own class to deserialize to.
projectUpdate(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectUpdate(String, Object, Class) instead and supply your own class to deserialize to.
projectUpdate(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectUpdate(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectUpdate(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectUpdate(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectUpdateSponsorship(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectUpdateSponsorship method with an empty input, deserializing to an object of the specified class.
projectUpdateSponsorship(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the projectUpdateSponsorship method with the given input, deserializing to an object of the specified class.
projectUpdateSponsorship(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectUpdateSponsorship method with an empty input using the given environment, deserializing to an object of the specified class.
projectUpdateSponsorship(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the projectUpdateSponsorship method with the given input using the given environment, deserializing to an object of the specified class.
projectUpdateSponsorship(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectUpdateSponsorship(String, Class) instead and supply your own class to deserialize to.
projectUpdateSponsorship(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectUpdateSponsorship(String, Object, Class) instead and supply your own class to deserialize to.
projectUpdateSponsorship(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectUpdateSponsorship(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
projectUpdateSponsorship(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.projectUpdateSponsorship(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
properties - Variable in class com.dnanexus.DXDataObject.Builder
 
put(String, JsonNode) - Method in class com.dnanexus.DXJSON.ObjectBuilder
Adds a key-value pair with an arbitrary JsonNode value.
put(String, String) - Method in class com.dnanexus.DXJSON.ObjectBuilder
Adds a key-value pair with a string value and returns the resulting ObjectBuilder.
put(String, int) - Method in class com.dnanexus.DXJSON.ObjectBuilder
Adds a key-value pair with a numeric value and returns the resulting ObjectBuilder.
put(String, long) - Method in class com.dnanexus.DXJSON.ObjectBuilder
Adds a key-value pair with a numeric value and returns the resulting ObjectBuilder.
put(String, double) - Method in class com.dnanexus.DXJSON.ObjectBuilder
Adds a key-value pair with a numeric value and returns the resulting ObjectBuilder.
put(String, boolean) - Method in class com.dnanexus.DXJSON.ObjectBuilder
Adds a key-value pair with a boolean value and returns the resulting ObjectBuilder.
putAllProperties(Map<String, String>) - Method in class com.dnanexus.DXDataObject.Builder
Sets the specified properties on the newly created data object.
putAllProperties(Map<String, String>) - Method in class com.dnanexus.DXDataObject
Sets properties on the object.
putAllProperties(Map<String, String>, List<String>) - Method in class com.dnanexus.DXDataObject
Sets and removes properties on the object.
putAllProperties(Map<String, String>) - Method in class com.dnanexus.ExecutableRunner
Sets the specified properties on the execution to be created.
putProperty(String, String) - Method in class com.dnanexus.DXDataObject.Builder
Sets the specified property on the newly created data object.
putProperty(String, String) - Method in class com.dnanexus.DXDataObject
Sets a property on the object.
putProperty(String, String) - Method in class com.dnanexus.ExecutableRunner
Sets the specified property on the execution to be created.

R

recordAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordAddTags method with an empty input, deserializing to an object of the specified class.
recordAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordAddTags method with the given input, deserializing to an object of the specified class.
recordAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
recordAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordAddTags method with the given input using the given environment, deserializing to an object of the specified class.
recordAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordAddTags(String, Class) instead and supply your own class to deserialize to.
recordAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordAddTags(String, Object, Class) instead and supply your own class to deserialize to.
recordAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordAddTypes(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordAddTypes method with an empty input, deserializing to an object of the specified class.
recordAddTypes(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordAddTypes method with the given input, deserializing to an object of the specified class.
recordAddTypes(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordAddTypes method with an empty input using the given environment, deserializing to an object of the specified class.
recordAddTypes(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordAddTypes method with the given input using the given environment, deserializing to an object of the specified class.
recordAddTypes(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordAddTypes(String, Class) instead and supply your own class to deserialize to.
recordAddTypes(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordAddTypes(String, Object, Class) instead and supply your own class to deserialize to.
recordAddTypes(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordAddTypes(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordAddTypes(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordAddTypes(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordClose(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordClose method with an empty input, deserializing to an object of the specified class.
recordClose(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordClose method with the given input, deserializing to an object of the specified class.
recordClose(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordClose method with an empty input using the given environment, deserializing to an object of the specified class.
recordClose(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordClose method with the given input using the given environment, deserializing to an object of the specified class.
recordClose(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordClose(String, Class) instead and supply your own class to deserialize to.
recordClose(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordClose(String, Object, Class) instead and supply your own class to deserialize to.
recordClose(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordClose(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordClose(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordClose(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordDescribe method with an empty input, deserializing to an object of the specified class.
recordDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordDescribe method with the given input, deserializing to an object of the specified class.
recordDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
recordDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordDescribe method with the given input using the given environment, deserializing to an object of the specified class.
recordDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordDescribe(String, Class) instead and supply your own class to deserialize to.
recordDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordDescribe(String, Object, Class) instead and supply your own class to deserialize to.
recordDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordGetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordGetDetails method with an empty input, deserializing to an object of the specified class.
recordGetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordGetDetails method with the given input, deserializing to an object of the specified class.
recordGetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordGetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
recordGetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordGetDetails method with the given input using the given environment, deserializing to an object of the specified class.
recordGetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordGetDetails(String, Class) instead and supply your own class to deserialize to.
recordGetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordGetDetails(String, Object, Class) instead and supply your own class to deserialize to.
recordGetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordGetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordGetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordGetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordListProjects(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordListProjects method with an empty input, deserializing to an object of the specified class.
recordListProjects(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordListProjects method with the given input, deserializing to an object of the specified class.
recordListProjects(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordListProjects method with an empty input using the given environment, deserializing to an object of the specified class.
recordListProjects(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordListProjects method with the given input using the given environment, deserializing to an object of the specified class.
recordListProjects(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordListProjects(String, Class) instead and supply your own class to deserialize to.
recordListProjects(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordListProjects(String, Object, Class) instead and supply your own class to deserialize to.
recordListProjects(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordListProjects(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordListProjects(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordListProjects(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordNew method with an empty input, deserializing to an object of the specified class.
recordNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordNew method with an empty input using the specified environment, deserializing to an object of the specified class.
recordNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordNew method with the specified input, deserializing to an object of the specified class.
recordNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordNew method with the specified input using the specified environment, deserializing to an object of the specified class.
recordNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordNew(Class) instead and supply your own class to deserialize to.
recordNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordNew(Object, Class) instead and supply your own class to deserialize to.
recordNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
recordNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordRemoveTags method with an empty input, deserializing to an object of the specified class.
recordRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordRemoveTags method with the given input, deserializing to an object of the specified class.
recordRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
recordRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
recordRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRemoveTags(String, Class) instead and supply your own class to deserialize to.
recordRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
recordRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordRemoveTypes(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordRemoveTypes method with an empty input, deserializing to an object of the specified class.
recordRemoveTypes(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordRemoveTypes method with the given input, deserializing to an object of the specified class.
recordRemoveTypes(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordRemoveTypes method with an empty input using the given environment, deserializing to an object of the specified class.
recordRemoveTypes(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordRemoveTypes method with the given input using the given environment, deserializing to an object of the specified class.
recordRemoveTypes(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRemoveTypes(String, Class) instead and supply your own class to deserialize to.
recordRemoveTypes(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRemoveTypes(String, Object, Class) instead and supply your own class to deserialize to.
recordRemoveTypes(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRemoveTypes(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordRemoveTypes(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRemoveTypes(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordRename(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordRename method with an empty input, deserializing to an object of the specified class.
recordRename(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordRename method with the given input, deserializing to an object of the specified class.
recordRename(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordRename method with an empty input using the given environment, deserializing to an object of the specified class.
recordRename(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordRename method with the given input using the given environment, deserializing to an object of the specified class.
recordRename(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRename(String, Class) instead and supply your own class to deserialize to.
recordRename(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRename(String, Object, Class) instead and supply your own class to deserialize to.
recordRename(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRename(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordRename(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordRename(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordSetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetDetails method with an empty input, deserializing to an object of the specified class.
recordSetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetDetails method with the given input, deserializing to an object of the specified class.
recordSetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
recordSetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetDetails method with the given input using the given environment, deserializing to an object of the specified class.
recordSetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetDetails(String, Class) instead and supply your own class to deserialize to.
recordSetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetDetails(String, Object, Class) instead and supply your own class to deserialize to.
recordSetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordSetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordSetProperties(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetProperties method with an empty input, deserializing to an object of the specified class.
recordSetProperties(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetProperties method with the given input, deserializing to an object of the specified class.
recordSetProperties(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetProperties method with an empty input using the given environment, deserializing to an object of the specified class.
recordSetProperties(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetProperties method with the given input using the given environment, deserializing to an object of the specified class.
recordSetProperties(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetProperties(String, Class) instead and supply your own class to deserialize to.
recordSetProperties(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetProperties(String, Object, Class) instead and supply your own class to deserialize to.
recordSetProperties(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetProperties(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordSetProperties(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetProperties(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordSetVisibility(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetVisibility method with an empty input, deserializing to an object of the specified class.
recordSetVisibility(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetVisibility method with the given input, deserializing to an object of the specified class.
recordSetVisibility(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetVisibility method with an empty input using the given environment, deserializing to an object of the specified class.
recordSetVisibility(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the recordSetVisibility method with the given input using the given environment, deserializing to an object of the specified class.
recordSetVisibility(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetVisibility(String, Class) instead and supply your own class to deserialize to.
recordSetVisibility(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetVisibility(String, Object, Class) instead and supply your own class to deserialize to.
recordSetVisibility(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetVisibility(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
recordSetVisibility(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.recordSetVisibility(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
removeFolder(String) - Method in class com.dnanexus.DXContainer
Removes the specified folder.
removeFolder(String, boolean) - Method in class com.dnanexus.DXContainer
Removes the specified folder, optionally removing all subfolders as well.
removeObjects(List<? extends DXDataObject>) - Method in class com.dnanexus.DXContainer
Removes the specified objects from the container.
removeProperty(String) - Method in class com.dnanexus.DXDataObject
Removes a property from the object.
removeTags(List<String>) - Method in class com.dnanexus.DXDataObject
Removes the specified tags from the object.
removeTypes(List<String>) - Method in class com.dnanexus.DXDataObject
Removes the specified types from the object.
rename(String) - Method in class com.dnanexus.DXDataObject
Changes the name of the object in its project.
renameFolder(String, String) - Method in class com.dnanexus.DXContainer
Renames the specified folder.
request(String, JsonNode) - Method in class com.dnanexus.DXHTTPRequest
request(String, JsonNode, DXHTTPRequest.RetryStrategy) - Method in class com.dnanexus.DXHTTPRequest
Issues a request against the specified resource and returns the result as a JSON object.
request(String, String) - Method in class com.dnanexus.DXHTTPRequest
request(String, String, DXHTTPRequest.RetryStrategy) - Method in class com.dnanexus.DXHTTPRequest
Issues a request against the specified resource and returns the result as a String.
ResourceNotFoundException - Exception in com.dnanexus.exceptions
A specified entity or resource could not be found.
ResourceNotFoundException(String, int) - Constructor for exception com.dnanexus.exceptions.ResourceNotFoundException
Creates a ResourceNotFoundException with the specified message and HTTP status code.
rootExecution - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
run() - Method in class com.dnanexus.ExecutableRunner
Runs the executable.
runInput - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
RunSpecification - Class in com.dnanexus
A run specification for an applet.
RunSpecification.Builder - Class in com.dnanexus
Builder class for creating RunSpecifications.

S

safeTreeToValue(JsonNode, Class<T>) - Static method in class com.dnanexus.DXJSON
Translates the given JSON object to an instance of the specified class.
ServiceUnavailableException - Exception in com.dnanexus.exceptions
Exception used to indicate that the request yielded 503 Service Unavailable and suggested that we retry at some point in the future.
ServiceUnavailableException(String, int) - Constructor for exception com.dnanexus.exceptions.ServiceUnavailableException
Creates a ServiceUnavailableException with the specified message and HTTP status code.
ServiceUnavailableException(String, int, int) - Constructor for exception com.dnanexus.exceptions.ServiceUnavailableException
 
setApiserverHost(String) - Method in class com.dnanexus.DXEnvironment.Builder
Sets the API server hostname.
setApiserverPort(int) - Method in class com.dnanexus.DXEnvironment.Builder
Sets the API server port.
setApiserverProtocol(String) - Method in class com.dnanexus.DXEnvironment.Builder
Sets the API server protocol ("http" or "https").
setBearerToken(String) - Method in class com.dnanexus.DXEnvironment.Builder
Sets the token to use to authenticate to the Platform.
setDescription(String) - Method in class com.dnanexus.DXApplet.Builder
Sets the description of the applet to be created.
setDetails(Object) - Method in class com.dnanexus.DXDataObject.Builder
Sets the details of the data object to be created.
setDetails(Object) - Method in class com.dnanexus.DXDataObject
Sets the details of the object.
setDetails(Object) - Method in class com.dnanexus.ExecutableRunner
Sets the execution details to the JSON serialized value of the specified object.
setFolder(String) - Method in class com.dnanexus.DXDataObject.Builder
Sets the folder in which the data object will be created.
setFolder(String, boolean) - Method in class com.dnanexus.DXDataObject.Builder
Sets the folder in which the data object will be created, optionally specifying that the folder and its parents should be created if necessary.
setFolder(String) - Method in class com.dnanexus.ExecutableRunner
Sets the folder in which the execution's outputs will be deposited.
setInput(Object) - Method in class com.dnanexus.ExecutableRunner
Sets the input hash to the JSON serialized value of the specified object.
setInputSpecification(List<? extends InputParameter>) - Method in class com.dnanexus.DXApplet.Builder
Sets the input specification of the applet to be created.
setJob(DXJob) - Method in class com.dnanexus.DXEnvironment.Builder
Sets the current job to the specified job.
setMediaType(String) - Method in class com.dnanexus.DXFile.Builder
Sets the Internet Media Type of the file to be created.
setName(String) - Method in class com.dnanexus.DXDataObject.Builder
Sets the name of the newly created data object.
setName(String) - Method in class com.dnanexus.DXProject.Builder
Sets the name of the new project.
setName(String) - Method in class com.dnanexus.ExecutableRunner
Sets the name of the resulting execution.
setOutputSpecification(List<? extends OutputParameter>) - Method in class com.dnanexus.DXApplet.Builder
Sets the output specification of the applet to be created.
setProject(DXContainer) - Method in class com.dnanexus.DXDataObject.Builder
Sets the project or container where the new data object will be created.
setProject(DXProject) - Method in class com.dnanexus.ExecutableRunner
Sets the project context of the resulting execution.
setProjectContext(DXProject) - Method in class com.dnanexus.DXEnvironment.Builder
Sets the project context to the specified project.
setRawInput(JsonNode) - Method in class com.dnanexus.ExecutableRunner
Sets the input hash to the specified JSON node.
setRunSpecification(RunSpecification) - Method in class com.dnanexus.DXApplet.Builder
Sets the run specification of the applet to be created.
setSecurityContext(JsonNode) - Method in class com.dnanexus.DXEnvironment.Builder
setSummary(String) - Method in class com.dnanexus.DXApplet.Builder
Sets the summary of the applet to be created.
setTitle(String) - Method in class com.dnanexus.DXApplet.Builder
Sets the title of the applet to be created.
setVisibility(boolean) - Method in class com.dnanexus.DXDataObject.Builder
Sets the visibility of the new data object.
setVisibility(boolean) - Method in class com.dnanexus.DXDataObject
Makes the object visible or hidden.
setWorkspace(DXContainer) - Method in class com.dnanexus.DXEnvironment.Builder
Sets the workspace to the specified container.
size() - Method in interface com.dnanexus.DXSearch.FindResultPage
Returns the number of results in the current page.
SpendingLimitExceededException - Exception in com.dnanexus.exceptions
The spending limit has been reached for the account that would be billed for this action.
SpendingLimitExceededException(String, int) - Constructor for exception com.dnanexus.exceptions.SpendingLimitExceededException
Creates a SpendingLimitExceededException with the specified message and HTTP status code.
stage - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
systemDescribeDataObjects(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeDataObjects method with an empty input, deserializing to an object of the specified class.
systemDescribeDataObjects(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeDataObjects method with an empty input using the specified environment, deserializing to an object of the specified class.
systemDescribeDataObjects(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeDataObjects method with the specified input, deserializing to an object of the specified class.
systemDescribeDataObjects(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeDataObjects method with the specified input using the specified environment, deserializing to an object of the specified class.
systemDescribeDataObjects() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeDataObjects(Class) instead and supply your own class to deserialize to.
systemDescribeDataObjects(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeDataObjects(Object, Class) instead and supply your own class to deserialize to.
systemDescribeDataObjects(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeDataObjects(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemDescribeDataObjects(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeDataObjects(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemDescribeExecutions(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeExecutions method with an empty input, deserializing to an object of the specified class.
systemDescribeExecutions(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeExecutions method with an empty input using the specified environment, deserializing to an object of the specified class.
systemDescribeExecutions(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeExecutions method with the specified input, deserializing to an object of the specified class.
systemDescribeExecutions(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeExecutions method with the specified input using the specified environment, deserializing to an object of the specified class.
systemDescribeExecutions() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeExecutions(Class) instead and supply your own class to deserialize to.
systemDescribeExecutions(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeExecutions(Object, Class) instead and supply your own class to deserialize to.
systemDescribeExecutions(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeExecutions(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemDescribeExecutions(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeExecutions(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemDescribeProjects(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeProjects method with an empty input, deserializing to an object of the specified class.
systemDescribeProjects(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeProjects method with an empty input using the specified environment, deserializing to an object of the specified class.
systemDescribeProjects(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeProjects method with the specified input, deserializing to an object of the specified class.
systemDescribeProjects(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemDescribeProjects method with the specified input using the specified environment, deserializing to an object of the specified class.
systemDescribeProjects() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeProjects(Class) instead and supply your own class to deserialize to.
systemDescribeProjects(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeProjects(Object, Class) instead and supply your own class to deserialize to.
systemDescribeProjects(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeProjects(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemDescribeProjects(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemDescribeProjects(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindAffiliates(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindAffiliates method with an empty input, deserializing to an object of the specified class.
systemFindAffiliates(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindAffiliates method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindAffiliates(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindAffiliates method with the specified input, deserializing to an object of the specified class.
systemFindAffiliates(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindAffiliates method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindAffiliates() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindAffiliates(Class) instead and supply your own class to deserialize to.
systemFindAffiliates(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindAffiliates(Object, Class) instead and supply your own class to deserialize to.
systemFindAffiliates(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindAffiliates(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindAffiliates(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindAffiliates(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindAnalyses(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindAnalyses method with an empty input, deserializing to an object of the specified class.
systemFindAnalyses(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindAnalyses method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindAnalyses(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindAnalyses method with the specified input, deserializing to an object of the specified class.
systemFindAnalyses(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindAnalyses method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindAnalyses() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindAnalyses(Class) instead and supply your own class to deserialize to.
systemFindAnalyses(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindAnalyses(Object, Class) instead and supply your own class to deserialize to.
systemFindAnalyses(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindAnalyses(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindAnalyses(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindAnalyses(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindApps(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindApps method with an empty input, deserializing to an object of the specified class.
systemFindApps(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindApps method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindApps(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindApps method with the specified input, deserializing to an object of the specified class.
systemFindApps(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindApps method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindApps() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindApps(Class) instead and supply your own class to deserialize to.
systemFindApps(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindApps(Object, Class) instead and supply your own class to deserialize to.
systemFindApps(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindApps(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindApps(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindApps(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindDataObjects(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindDataObjects method with an empty input, deserializing to an object of the specified class.
systemFindDataObjects(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindDataObjects method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindDataObjects(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindDataObjects method with the specified input, deserializing to an object of the specified class.
systemFindDataObjects(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindDataObjects method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindDataObjects() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindDataObjects(Class) instead and supply your own class to deserialize to.
systemFindDataObjects(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindDataObjects(Object, Class) instead and supply your own class to deserialize to.
systemFindDataObjects(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindDataObjects(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindDataObjects(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindDataObjects(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindExecutions(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindExecutions method with an empty input, deserializing to an object of the specified class.
systemFindExecutions(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindExecutions method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindExecutions(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindExecutions method with the specified input, deserializing to an object of the specified class.
systemFindExecutions(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindExecutions method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindExecutions() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindExecutions(Class) instead and supply your own class to deserialize to.
systemFindExecutions(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindExecutions(Object, Class) instead and supply your own class to deserialize to.
systemFindExecutions(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindExecutions(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindExecutions(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindExecutions(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindJobs(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindJobs method with an empty input, deserializing to an object of the specified class.
systemFindJobs(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindJobs method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindJobs(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindJobs method with the specified input, deserializing to an object of the specified class.
systemFindJobs(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindJobs method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindJobs() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindJobs(Class) instead and supply your own class to deserialize to.
systemFindJobs(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindJobs(Object, Class) instead and supply your own class to deserialize to.
systemFindJobs(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindJobs(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindJobs(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindJobs(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindOrgs(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindOrgs method with an empty input, deserializing to an object of the specified class.
systemFindOrgs(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindOrgs method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindOrgs(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindOrgs method with the specified input, deserializing to an object of the specified class.
systemFindOrgs(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindOrgs method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindOrgs() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindOrgs(Class) instead and supply your own class to deserialize to.
systemFindOrgs(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindOrgs(Object, Class) instead and supply your own class to deserialize to.
systemFindOrgs(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindOrgs(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindOrgs(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindOrgs(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindProjectMembers(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindProjectMembers method with an empty input, deserializing to an object of the specified class.
systemFindProjectMembers(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindProjectMembers method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindProjectMembers(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindProjectMembers method with the specified input, deserializing to an object of the specified class.
systemFindProjectMembers(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindProjectMembers method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindProjectMembers() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindProjectMembers(Class) instead and supply your own class to deserialize to.
systemFindProjectMembers(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindProjectMembers(Object, Class) instead and supply your own class to deserialize to.
systemFindProjectMembers(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindProjectMembers(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindProjectMembers(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindProjectMembers(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindProjects(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindProjects method with an empty input, deserializing to an object of the specified class.
systemFindProjects(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindProjects method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindProjects(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindProjects method with the specified input, deserializing to an object of the specified class.
systemFindProjects(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindProjects method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindProjects() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindProjects(Class) instead and supply your own class to deserialize to.
systemFindProjects(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindProjects(Object, Class) instead and supply your own class to deserialize to.
systemFindProjects(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindProjects(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindProjects(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindProjects(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindUsers(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindUsers method with an empty input, deserializing to an object of the specified class.
systemFindUsers(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindUsers method with an empty input using the specified environment, deserializing to an object of the specified class.
systemFindUsers(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindUsers method with the specified input, deserializing to an object of the specified class.
systemFindUsers(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemFindUsers method with the specified input using the specified environment, deserializing to an object of the specified class.
systemFindUsers() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindUsers(Class) instead and supply your own class to deserialize to.
systemFindUsers(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindUsers(Object, Class) instead and supply your own class to deserialize to.
systemFindUsers(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindUsers(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemFindUsers(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemFindUsers(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemGlobalSearch(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemGlobalSearch method with an empty input, deserializing to an object of the specified class.
systemGlobalSearch(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemGlobalSearch method with an empty input using the specified environment, deserializing to an object of the specified class.
systemGlobalSearch(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemGlobalSearch method with the specified input, deserializing to an object of the specified class.
systemGlobalSearch(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemGlobalSearch method with the specified input using the specified environment, deserializing to an object of the specified class.
systemGlobalSearch() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemGlobalSearch(Class) instead and supply your own class to deserialize to.
systemGlobalSearch(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemGlobalSearch(Object, Class) instead and supply your own class to deserialize to.
systemGlobalSearch(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemGlobalSearch(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemGlobalSearch(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemGlobalSearch(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemGreet(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemGreet method with an empty input, deserializing to an object of the specified class.
systemGreet(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemGreet method with an empty input using the specified environment, deserializing to an object of the specified class.
systemGreet(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemGreet method with the specified input, deserializing to an object of the specified class.
systemGreet(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemGreet method with the specified input using the specified environment, deserializing to an object of the specified class.
systemGreet() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemGreet(Class) instead and supply your own class to deserialize to.
systemGreet(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemGreet(Object, Class) instead and supply your own class to deserialize to.
systemGreet(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemGreet(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemGreet(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemGreet(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemHeaders(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemHeaders method with an empty input, deserializing to an object of the specified class.
systemHeaders(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemHeaders method with an empty input using the specified environment, deserializing to an object of the specified class.
systemHeaders(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemHeaders method with the specified input, deserializing to an object of the specified class.
systemHeaders(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemHeaders method with the specified input using the specified environment, deserializing to an object of the specified class.
systemHeaders() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemHeaders(Class) instead and supply your own class to deserialize to.
systemHeaders(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemHeaders(Object, Class) instead and supply your own class to deserialize to.
systemHeaders(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemHeaders(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemHeaders(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemHeaders(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemResolveDataObjects(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemResolveDataObjects method with an empty input, deserializing to an object of the specified class.
systemResolveDataObjects(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemResolveDataObjects method with an empty input using the specified environment, deserializing to an object of the specified class.
systemResolveDataObjects(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemResolveDataObjects method with the specified input, deserializing to an object of the specified class.
systemResolveDataObjects(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemResolveDataObjects method with the specified input using the specified environment, deserializing to an object of the specified class.
systemResolveDataObjects() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemResolveDataObjects(Class) instead and supply your own class to deserialize to.
systemResolveDataObjects(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemResolveDataObjects(Object, Class) instead and supply your own class to deserialize to.
systemResolveDataObjects(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemResolveDataObjects(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemResolveDataObjects(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemResolveDataObjects(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemShortenURL(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemShortenURL method with an empty input, deserializing to an object of the specified class.
systemShortenURL(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemShortenURL method with an empty input using the specified environment, deserializing to an object of the specified class.
systemShortenURL(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemShortenURL method with the specified input, deserializing to an object of the specified class.
systemShortenURL(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemShortenURL method with the specified input using the specified environment, deserializing to an object of the specified class.
systemShortenURL() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemShortenURL(Class) instead and supply your own class to deserialize to.
systemShortenURL(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemShortenURL(Object, Class) instead and supply your own class to deserialize to.
systemShortenURL(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemShortenURL(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemShortenURL(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemShortenURL(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
systemWhoami(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemWhoami method with an empty input, deserializing to an object of the specified class.
systemWhoami(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemWhoami method with an empty input using the specified environment, deserializing to an object of the specified class.
systemWhoami(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the systemWhoami method with the specified input, deserializing to an object of the specified class.
systemWhoami(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the systemWhoami method with the specified input using the specified environment, deserializing to an object of the specified class.
systemWhoami() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemWhoami(Class) instead and supply your own class to deserialize to.
systemWhoami(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemWhoami(Object, Class) instead and supply your own class to deserialize to.
systemWhoami(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemWhoami(Class, DXEnvironment) instead and supply your own class to deserialize to.
systemWhoami(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.systemWhoami(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.

T

tags - Variable in class com.dnanexus.DXDataObject.Builder
 
terminate() - Method in class com.dnanexus.DXAnalysis
 
terminate() - Method in class com.dnanexus.DXExecution
Terminates the execution.
terminate() - Method in class com.dnanexus.DXJob
 
toString() - Method in class com.dnanexus.DXObject
 
toString() - Method in exception com.dnanexus.exceptions.DXAPIException
 
toString() - Method in exception com.dnanexus.exceptions.InvalidAuthenticationException
 
toString() - Method in exception com.dnanexus.exceptions.InvalidInputException
 
toString() - Method in exception com.dnanexus.exceptions.InvalidStateException
 
toString() - Method in exception com.dnanexus.exceptions.InvalidTypeException
 
toString() - Method in exception com.dnanexus.exceptions.PermissionDeniedException
 
toString() - Method in exception com.dnanexus.exceptions.ResourceNotFoundException
 
toString() - Method in exception com.dnanexus.exceptions.SpendingLimitExceededException
 
totalPrice - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
types - Variable in class com.dnanexus.DXDataObject.Builder
 

U

upload(byte[]) - Method in class com.dnanexus.DXFile.Builder
Uploads the data in the specified byte array to the file to be created.
upload(InputStream) - Method in class com.dnanexus.DXFile.Builder
Uploads the data in the specified stream to the file to be created.
upload(byte[]) - Method in class com.dnanexus.DXFile
Uploads data from the specified byte array to the file.
upload(InputStream) - Method in class com.dnanexus.DXFile
Uploads data from the specified stream to the file.
userDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the userDescribe method with an empty input, deserializing to an object of the specified class.
userDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the userDescribe method with the given input, deserializing to an object of the specified class.
userDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the userDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
userDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the userDescribe method with the given input using the given environment, deserializing to an object of the specified class.
userDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.userDescribe(String, Class) instead and supply your own class to deserialize to.
userDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.userDescribe(String, Object, Class) instead and supply your own class to deserialize to.
userDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.userDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
userDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.userDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
userUpdate(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the userUpdate method with an empty input, deserializing to an object of the specified class.
userUpdate(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the userUpdate method with the given input, deserializing to an object of the specified class.
userUpdate(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the userUpdate method with an empty input using the given environment, deserializing to an object of the specified class.
userUpdate(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the userUpdate method with the given input using the given environment, deserializing to an object of the specified class.
userUpdate(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.userUpdate(String, Class) instead and supply your own class to deserialize to.
userUpdate(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.userUpdate(String, Object, Class) instead and supply your own class to deserialize to.
userUpdate(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.userUpdate(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
userUpdate(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.userUpdate(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.

V

valueOf(String) - Static method in enum com.dnanexus.AccessLevel
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum com.dnanexus.AnalysisState
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum com.dnanexus.ColumnType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum com.dnanexus.DataObjectState
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum com.dnanexus.DXHTTPRequest.RetryStrategy
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum com.dnanexus.DXSearch.VisibilityQuery
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum com.dnanexus.IOClass
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum com.dnanexus.JobState
Returns the enum constant of this type with the specified name.
values() - Static method in enum com.dnanexus.AccessLevel
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum com.dnanexus.AnalysisState
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum com.dnanexus.ColumnType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum com.dnanexus.DataObjectState
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum com.dnanexus.DXHTTPRequest.RetryStrategy
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum com.dnanexus.DXSearch.VisibilityQuery
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum com.dnanexus.IOClass
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum com.dnanexus.JobState
Returns an array containing the constants of this enum type, in the order they are declared.

W

waitUntilDone() - Method in class com.dnanexus.DXAnalysis
Waits until the analysis has successfully completed and is in the DONE state.
waitUntilDone() - Method in class com.dnanexus.DXExecution
Waits until the execution has successfully completed and is in the DONE state.
waitUntilDone() - Method in class com.dnanexus.DXJob
Waits until the job has successfully completed and is in the DONE state.
withClassAnalysis() - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns analyses (filters out jobs).
withClassApplet() - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns applets (filters out data objects of all other classes).
withClassFile() - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns files (filters out data objects of all other classes).
withClassGTable() - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns GTables (filters out data objects of all other classes).
withClassJob() - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns jobs (filters out analyses).
withClassRecord() - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns records (filters out data objects of all other classes).
withClassWorkflow() - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns workflows (filters out data objects of all other classes).
withCustomFields(String...) - Method in class com.dnanexus.DXDataObject.DescribeOptions
Returns a DescribeOptions that behaves like the current one, except that only the specified fields will be included in the result.
withCustomFields(Collection<? extends String>) - Method in class com.dnanexus.DXDataObject.DescribeOptions
Returns a DescribeOptions that behaves like the current one, except that only the fields in the specified collection will be included in the result.
withDetails() - Method in class com.dnanexus.DXDataObject.DescribeOptions
Returns a DescribeOptions that behaves like the current one, except that the details field will be included in the result.
withDetails(Object) - Method in class com.dnanexus.ExecutableRunner
Deprecated.
withExecutable(DXExecutable<?>) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only return executions with the specified executable.
withIdsIn(Collection<? extends DXDataObject>) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects whose IDs match one of the specified data objects.
withIdsIn(Collection<? extends DXExecution>) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions whose IDs match one of the specified executions.
withInput(Object) - Method in class com.dnanexus.ExecutableRunner
Deprecated.
withKey(String) - Static method in class com.dnanexus.DXSearch.PropertiesQuery
A query that the specified property key is present.
withKeyAndValue(String, String) - Static method in class com.dnanexus.DXSearch.PropertiesQuery
A query that the specified property key has the specified property value.
withLinkTo(DXDataObject) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects that link to the specified data object.
withMinimumAccessLevel(AccessLevel) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects to which the requesting user has at least the specified level of permission in some project.
withName(String) - Method in class com.dnanexus.ExecutableRunner
Deprecated.
withOriginJob(DXJob) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only return executions with the specified origin job.
withParentAnalysis(DXAnalysis) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only return executions with the specified parent analysis.
withParentJob(DXJob) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only return executions with the specified parent job.
withProperties() - Method in class com.dnanexus.DXDataObject.DescribeOptions
Returns a DescribeOptions that behaves like the current one, except that the properties field will be included in the result.
withProperties(DXSearch.PropertiesQuery) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects matching the specified properties query.
withProperties(DXSearch.PropertiesQuery) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions matching the specified properties query.
withProperty(String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects where the specified property is present.
withProperty(String, String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects where the specified property has the specified value.
withProperty(String) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions where the specified property is present.
withProperty(String, String) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions where the specified property has the specified value.
withRawInput(JsonNode) - Method in class com.dnanexus.ExecutableRunner
withRootExecution(DXExecution) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only return executions with the specified root execution.
withState(DataObjectState) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects with the specified state.
withState(AnalysisState...) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions in one of the specified analysis states.
withState(JobState...) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions in one of the specified job states.
withTag(String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects with the specified tag.
withTag(String) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions with the specified tag.
withTags(DXSearch.TagsQuery) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects matching the specified tags query.
withTags(DXSearch.TagsQuery) - Method in class com.dnanexus.DXSearch.FindExecutionsRequestBuilder
Only returns executions matching the specified tags query.
withType(String) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects with the specified type.
withTypes(DXSearch.TypeQuery) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects matching the specified types query.
withVisibility(DXSearch.VisibilityQuery) - Method in class com.dnanexus.DXSearch.FindDataObjectsRequestBuilder
Only returns data objects with the specified visibility (visible or hidden).
workflowAddStage(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddStage method with an empty input, deserializing to an object of the specified class.
workflowAddStage(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddStage method with the given input, deserializing to an object of the specified class.
workflowAddStage(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddStage method with an empty input using the given environment, deserializing to an object of the specified class.
workflowAddStage(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddStage method with the given input using the given environment, deserializing to an object of the specified class.
workflowAddStage(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddStage(String, Class) instead and supply your own class to deserialize to.
workflowAddStage(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddStage(String, Object, Class) instead and supply your own class to deserialize to.
workflowAddStage(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddStage(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowAddStage(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddStage(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowAddTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddTags method with an empty input, deserializing to an object of the specified class.
workflowAddTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddTags method with the given input, deserializing to an object of the specified class.
workflowAddTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddTags method with an empty input using the given environment, deserializing to an object of the specified class.
workflowAddTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddTags method with the given input using the given environment, deserializing to an object of the specified class.
workflowAddTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddTags(String, Class) instead and supply your own class to deserialize to.
workflowAddTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddTags(String, Object, Class) instead and supply your own class to deserialize to.
workflowAddTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowAddTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowAddTypes(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddTypes method with an empty input, deserializing to an object of the specified class.
workflowAddTypes(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddTypes method with the given input, deserializing to an object of the specified class.
workflowAddTypes(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddTypes method with an empty input using the given environment, deserializing to an object of the specified class.
workflowAddTypes(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowAddTypes method with the given input using the given environment, deserializing to an object of the specified class.
workflowAddTypes(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddTypes(String, Class) instead and supply your own class to deserialize to.
workflowAddTypes(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddTypes(String, Object, Class) instead and supply your own class to deserialize to.
workflowAddTypes(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddTypes(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowAddTypes(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowAddTypes(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowClose(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowClose method with an empty input, deserializing to an object of the specified class.
workflowClose(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowClose method with the given input, deserializing to an object of the specified class.
workflowClose(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowClose method with an empty input using the given environment, deserializing to an object of the specified class.
workflowClose(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowClose method with the given input using the given environment, deserializing to an object of the specified class.
workflowClose(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowClose(String, Class) instead and supply your own class to deserialize to.
workflowClose(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowClose(String, Object, Class) instead and supply your own class to deserialize to.
workflowClose(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowClose(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowClose(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowClose(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowDescribe(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowDescribe method with an empty input, deserializing to an object of the specified class.
workflowDescribe(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowDescribe method with the given input, deserializing to an object of the specified class.
workflowDescribe(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowDescribe method with an empty input using the given environment, deserializing to an object of the specified class.
workflowDescribe(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowDescribe method with the given input using the given environment, deserializing to an object of the specified class.
workflowDescribe(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowDescribe(String, Class) instead and supply your own class to deserialize to.
workflowDescribe(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowDescribe(String, Object, Class) instead and supply your own class to deserialize to.
workflowDescribe(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowDescribe(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowDescribe(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowDescribe(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowDryRun(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowDryRun method with an empty input, deserializing to an object of the specified class.
workflowDryRun(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowDryRun method with the given input, deserializing to an object of the specified class.
workflowDryRun(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowDryRun method with an empty input using the given environment, deserializing to an object of the specified class.
workflowDryRun(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowDryRun method with the given input using the given environment, deserializing to an object of the specified class.
workflowDryRun(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowDryRun(String, Class) instead and supply your own class to deserialize to.
workflowDryRun(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowDryRun(String, Object, Class) instead and supply your own class to deserialize to.
workflowDryRun(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowDryRun(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowDryRun(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowDryRun(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowGetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowGetDetails method with an empty input, deserializing to an object of the specified class.
workflowGetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowGetDetails method with the given input, deserializing to an object of the specified class.
workflowGetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowGetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
workflowGetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowGetDetails method with the given input using the given environment, deserializing to an object of the specified class.
workflowGetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowGetDetails(String, Class) instead and supply your own class to deserialize to.
workflowGetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowGetDetails(String, Object, Class) instead and supply your own class to deserialize to.
workflowGetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowGetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowGetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowGetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowIsStageCompatible(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowIsStageCompatible method with an empty input, deserializing to an object of the specified class.
workflowIsStageCompatible(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowIsStageCompatible method with the given input, deserializing to an object of the specified class.
workflowIsStageCompatible(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowIsStageCompatible method with an empty input using the given environment, deserializing to an object of the specified class.
workflowIsStageCompatible(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowIsStageCompatible method with the given input using the given environment, deserializing to an object of the specified class.
workflowIsStageCompatible(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowIsStageCompatible(String, Class) instead and supply your own class to deserialize to.
workflowIsStageCompatible(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowIsStageCompatible(String, Object, Class) instead and supply your own class to deserialize to.
workflowIsStageCompatible(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowIsStageCompatible(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowIsStageCompatible(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowIsStageCompatible(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowListProjects(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowListProjects method with an empty input, deserializing to an object of the specified class.
workflowListProjects(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowListProjects method with the given input, deserializing to an object of the specified class.
workflowListProjects(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowListProjects method with an empty input using the given environment, deserializing to an object of the specified class.
workflowListProjects(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowListProjects method with the given input using the given environment, deserializing to an object of the specified class.
workflowListProjects(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowListProjects(String, Class) instead and supply your own class to deserialize to.
workflowListProjects(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowListProjects(String, Object, Class) instead and supply your own class to deserialize to.
workflowListProjects(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowListProjects(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowListProjects(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowListProjects(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowMoveStage(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowMoveStage method with an empty input, deserializing to an object of the specified class.
workflowMoveStage(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowMoveStage method with the given input, deserializing to an object of the specified class.
workflowMoveStage(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowMoveStage method with an empty input using the given environment, deserializing to an object of the specified class.
workflowMoveStage(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowMoveStage method with the given input using the given environment, deserializing to an object of the specified class.
workflowMoveStage(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowMoveStage(String, Class) instead and supply your own class to deserialize to.
workflowMoveStage(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowMoveStage(String, Object, Class) instead and supply your own class to deserialize to.
workflowMoveStage(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowMoveStage(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowMoveStage(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowMoveStage(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowNew(Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowNew method with an empty input, deserializing to an object of the specified class.
workflowNew(Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowNew method with an empty input using the specified environment, deserializing to an object of the specified class.
workflowNew(Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowNew method with the specified input, deserializing to an object of the specified class.
workflowNew(Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowNew method with the specified input using the specified environment, deserializing to an object of the specified class.
workflowNew() - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowNew(Class) instead and supply your own class to deserialize to.
workflowNew(JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowNew(Object, Class) instead and supply your own class to deserialize to.
workflowNew(DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowNew(Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowNew(JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowNew(Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowOverwrite(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowOverwrite method with an empty input, deserializing to an object of the specified class.
workflowOverwrite(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowOverwrite method with the given input, deserializing to an object of the specified class.
workflowOverwrite(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowOverwrite method with an empty input using the given environment, deserializing to an object of the specified class.
workflowOverwrite(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowOverwrite method with the given input using the given environment, deserializing to an object of the specified class.
workflowOverwrite(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowOverwrite(String, Class) instead and supply your own class to deserialize to.
workflowOverwrite(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowOverwrite(String, Object, Class) instead and supply your own class to deserialize to.
workflowOverwrite(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowOverwrite(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowOverwrite(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowOverwrite(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRemoveStage(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveStage method with an empty input, deserializing to an object of the specified class.
workflowRemoveStage(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveStage method with the given input, deserializing to an object of the specified class.
workflowRemoveStage(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveStage method with an empty input using the given environment, deserializing to an object of the specified class.
workflowRemoveStage(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveStage method with the given input using the given environment, deserializing to an object of the specified class.
workflowRemoveStage(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveStage(String, Class) instead and supply your own class to deserialize to.
workflowRemoveStage(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveStage(String, Object, Class) instead and supply your own class to deserialize to.
workflowRemoveStage(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveStage(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRemoveStage(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveStage(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRemoveTags(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveTags method with an empty input, deserializing to an object of the specified class.
workflowRemoveTags(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveTags method with the given input, deserializing to an object of the specified class.
workflowRemoveTags(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveTags method with an empty input using the given environment, deserializing to an object of the specified class.
workflowRemoveTags(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveTags method with the given input using the given environment, deserializing to an object of the specified class.
workflowRemoveTags(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveTags(String, Class) instead and supply your own class to deserialize to.
workflowRemoveTags(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveTags(String, Object, Class) instead and supply your own class to deserialize to.
workflowRemoveTags(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveTags(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRemoveTags(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveTags(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRemoveTypes(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveTypes method with an empty input, deserializing to an object of the specified class.
workflowRemoveTypes(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveTypes method with the given input, deserializing to an object of the specified class.
workflowRemoveTypes(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveTypes method with an empty input using the given environment, deserializing to an object of the specified class.
workflowRemoveTypes(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRemoveTypes method with the given input using the given environment, deserializing to an object of the specified class.
workflowRemoveTypes(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveTypes(String, Class) instead and supply your own class to deserialize to.
workflowRemoveTypes(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveTypes(String, Object, Class) instead and supply your own class to deserialize to.
workflowRemoveTypes(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveTypes(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRemoveTypes(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRemoveTypes(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRename(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRename method with an empty input, deserializing to an object of the specified class.
workflowRename(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRename method with the given input, deserializing to an object of the specified class.
workflowRename(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRename method with an empty input using the given environment, deserializing to an object of the specified class.
workflowRename(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRename method with the given input using the given environment, deserializing to an object of the specified class.
workflowRename(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRename(String, Class) instead and supply your own class to deserialize to.
workflowRename(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRename(String, Object, Class) instead and supply your own class to deserialize to.
workflowRename(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRename(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRename(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRename(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRun(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRun method with an empty input, deserializing to an object of the specified class.
workflowRun(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRun method with the given input, deserializing to an object of the specified class.
workflowRun(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRun method with an empty input using the given environment, deserializing to an object of the specified class.
workflowRun(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowRun method with the given input using the given environment, deserializing to an object of the specified class.
workflowRun(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRun(String, Class) instead and supply your own class to deserialize to.
workflowRun(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRun(String, Object, Class) instead and supply your own class to deserialize to.
workflowRun(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRun(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowRun(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowRun(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowSetDetails(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetDetails method with an empty input, deserializing to an object of the specified class.
workflowSetDetails(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetDetails method with the given input, deserializing to an object of the specified class.
workflowSetDetails(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetDetails method with an empty input using the given environment, deserializing to an object of the specified class.
workflowSetDetails(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetDetails method with the given input using the given environment, deserializing to an object of the specified class.
workflowSetDetails(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetDetails(String, Class) instead and supply your own class to deserialize to.
workflowSetDetails(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetDetails(String, Object, Class) instead and supply your own class to deserialize to.
workflowSetDetails(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetDetails(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowSetDetails(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetDetails(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowSetProperties(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetProperties method with an empty input, deserializing to an object of the specified class.
workflowSetProperties(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetProperties method with the given input, deserializing to an object of the specified class.
workflowSetProperties(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetProperties method with an empty input using the given environment, deserializing to an object of the specified class.
workflowSetProperties(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetProperties method with the given input using the given environment, deserializing to an object of the specified class.
workflowSetProperties(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetProperties(String, Class) instead and supply your own class to deserialize to.
workflowSetProperties(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetProperties(String, Object, Class) instead and supply your own class to deserialize to.
workflowSetProperties(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetProperties(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowSetProperties(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetProperties(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowSetStageInputs(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetStageInputs method with an empty input, deserializing to an object of the specified class.
workflowSetStageInputs(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetStageInputs method with the given input, deserializing to an object of the specified class.
workflowSetStageInputs(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetStageInputs method with an empty input using the given environment, deserializing to an object of the specified class.
workflowSetStageInputs(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetStageInputs method with the given input using the given environment, deserializing to an object of the specified class.
workflowSetStageInputs(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetStageInputs(String, Class) instead and supply your own class to deserialize to.
workflowSetStageInputs(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetStageInputs(String, Object, Class) instead and supply your own class to deserialize to.
workflowSetStageInputs(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetStageInputs(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowSetStageInputs(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetStageInputs(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowSetVisibility(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetVisibility method with an empty input, deserializing to an object of the specified class.
workflowSetVisibility(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetVisibility method with the given input, deserializing to an object of the specified class.
workflowSetVisibility(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetVisibility method with an empty input using the given environment, deserializing to an object of the specified class.
workflowSetVisibility(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowSetVisibility method with the given input using the given environment, deserializing to an object of the specified class.
workflowSetVisibility(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetVisibility(String, Class) instead and supply your own class to deserialize to.
workflowSetVisibility(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetVisibility(String, Object, Class) instead and supply your own class to deserialize to.
workflowSetVisibility(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetVisibility(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowSetVisibility(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowSetVisibility(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowUpdate(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowUpdate method with an empty input, deserializing to an object of the specified class.
workflowUpdate(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowUpdate method with the given input, deserializing to an object of the specified class.
workflowUpdate(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowUpdate method with an empty input using the given environment, deserializing to an object of the specified class.
workflowUpdate(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowUpdate method with the given input using the given environment, deserializing to an object of the specified class.
workflowUpdate(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowUpdate(String, Class) instead and supply your own class to deserialize to.
workflowUpdate(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowUpdate(String, Object, Class) instead and supply your own class to deserialize to.
workflowUpdate(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowUpdate(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowUpdate(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowUpdate(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowUpdateStageExecutable(String, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowUpdateStageExecutable method with an empty input, deserializing to an object of the specified class.
workflowUpdateStageExecutable(String, Object, Class<T>) - Static method in class com.dnanexus.DXAPI
Invokes the workflowUpdateStageExecutable method with the given input, deserializing to an object of the specified class.
workflowUpdateStageExecutable(String, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowUpdateStageExecutable method with an empty input using the given environment, deserializing to an object of the specified class.
workflowUpdateStageExecutable(String, Object, Class<T>, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Invokes the workflowUpdateStageExecutable method with the given input using the given environment, deserializing to an object of the specified class.
workflowUpdateStageExecutable(String) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowUpdateStageExecutable(String, Class) instead and supply your own class to deserialize to.
workflowUpdateStageExecutable(String, JsonNode) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowUpdateStageExecutable(String, Object, Class) instead and supply your own class to deserialize to.
workflowUpdateStageExecutable(String, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowUpdateStageExecutable(String, Class, DXEnvironment) instead and supply your own class to deserialize to.
workflowUpdateStageExecutable(String, JsonNode, DXEnvironment) - Static method in class com.dnanexus.DXAPI
Deprecated.
Use DXAPI.workflowUpdateStageExecutable(String, Object, Class, DXEnvironment) instead and supply your own class to deserialize to.
workspace - Variable in class com.dnanexus.DXExecution.DescribeResponseHash
 
writeJobOutput(Object) - Static method in class com.dnanexus.DXUtil
Writes the job output.
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